RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 COQ10BQ9H8M1 238 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 GPN1Q9HCN4 374 aaPredicted RBP16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 DGKBQ9Y6T7 804 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 DPPA5A6NC42 116 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 AIREO43918 545 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 GADD45GO95257 159 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 EEFSECP57772 596 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 ADGRF1Q5T601 910 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 PJA1Q8NG27 643 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 DIRAS2Q96HU8 199 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 SNX7Q9UNH6 387 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 TCRBV7S3A2A0A539 114 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 TFECO14948 347 aaPredicted RBP16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 SLC7A1P30825 629 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 PCDH1Q08174 1060 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 MYBPC3Q14896 1274 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 ZNF554Q86TJ5 538 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 HERVK_113Q902F9 699 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 Q9Y3F1 56 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 PRORSD1PA6NEY8 169 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 STARP49675 285 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 MTPNP58546 118 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 TMEM214Q6NUQ4 689 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 ATCAYQ86WG3 371 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 FAM129CQ86XR2 697 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 ZMIZ2Q8NF64 920 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 TMEM209Q96SK2 561 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 PEX16Q9Y5Y5 336 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 WASF2Q9Y6W5 498 aa16.25■□□□□ 0.19
PCDHA1-203ENST00000504120 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 DNAJB1P25685 340 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 CXorf57Q6NSI4 855 aaKnown RBP16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 PAQR3Q6TCH7 311 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 GTPBP3Q969Y2 492 aaKnown RBP16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 ZDHHC3Q9NYG2 299 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 CDCA2Q69YH5 1023 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 C11orf24Q96F05 449 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 ZNF570Q96NI8 536 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 BCAS3Q9H6U6 928 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 TRIM39Q9HCM9 518 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 MAP10Q9P2G4 905 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 TMEM59LQ9UK28 342 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 NRP1O14786 923 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 INHAP05111 366 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 PRPS1L1P21108 318 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 VITQ6UXI7 678 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 FCGR1BQ92637 280 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 TWNKQ96RR1 684 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 CHCHD6Q9BRQ6 235 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 SUV39H2Q9H5I1 410 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 RPS24P62847 133 aaKnown RBP16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 TMEM44Q2T9K0 475 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 FBXL22Q6P050 247 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 RAB43Q86YS6 212 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 SLC35F5Q8WV83 523 aa16.24■□□□□ 0.19
PCDHA1-203ENST00000504120 YAP1P46937 504 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 SLC25A11Q02978 314 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 PRKCZQ05513 592 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 PITRM1Q5JRX3 1037 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 EGFLAMQ63HQ2 1017 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 AMZ2Q86W34 360 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 KCNN2Q9H2S1 579 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 EBF3Q9H4W6 596 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 ZNF536O15090 1300 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 CA12O43570 354 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 ALAS2P22557 587 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 GRIA1P42261 906 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 NFKB2Q00653 900 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 SLC10A7Q0GE19 358 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 KCTD8Q6ZWB6 473 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 CEP68Q76N32 757 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 ZNF433Q8N7K0 673 aaPredicted RBP16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 TTLQ8NG68 377 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 HPS1Q92902 700 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 GPR88Q9GZN0 384 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 SRMSQ9H3Y6 488 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 THUMPD1Q9NXG2 353 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 GDAP2Q9NXN4 497 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 SLC45A1Q9Y2W3 748 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 KLF11O14901 512 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 B3GALT2O43825 422 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 HCN1O60741 890 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 IFNA6P05013 189 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 AKT2P31751 481 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 EIPR1Q53HC9 387 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 ACSBG2Q5FVE4 666 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 SIRPB2Q5JXA9 342 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 HID1Q8IV36 788 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 ASB9Q96DX5 294 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 TRNT1Q96Q11 434 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 PTPN18Q99952 460 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 OR2AG1Q9H205 316 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 USP29Q9HBJ7 922 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 CD320Q9NPF0 282 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 RBM7Q9Y580 266 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 IQCMA0A1B0GVH7 501 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 A8MT66 165 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 C9IYK1 514 aa16.23■□□□□ 0.19
PCDHA1-203ENST00000504120 WNT9AO14904 365 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms