RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ACOT8O14734 319 aa8.79□□□□□ -1
FN1-227ENST00000498719 SHOXO15266 292 aa8.79□□□□□ -1
FN1-227ENST00000498719 HTRA2O43464 458 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 B4GALT3O60512 393 aa8.79□□□□□ -1
FN1-227ENST00000498719 ZNF189O75820 626 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 CNTN5O94779 1100 aa8.79□□□□□ -1
FN1-227ENST00000498719 CELF2O95319 508 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 PEX11BO96011 259 aa8.79□□□□□ -1
FN1-227ENST00000498719 ME2P23368 584 aa8.79□□□□□ -1
FN1-227ENST00000498719 PTX3P26022 381 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 YWHAQP27348 245 aa8.79□□□□□ -1
FN1-227ENST00000498719 RPL9P32969 192 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 DHPSP49366 369 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 CDKL1Q00532 357 aa8.79□□□□□ -1
FN1-227ENST00000498719 DSC2Q02487 901 aa8.79□□□□□ -1
FN1-227ENST00000498719 ZNF33AQ06730 810 aa8.79□□□□□ -1
FN1-227ENST00000498719 RALGDSQ12967 914 aa8.79□□□□□ -1
FN1-227ENST00000498719 ADGRE1Q14246 886 aa8.79□□□□□ -1
FN1-227ENST00000498719 HABP2Q14520 560 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 PTPRCAPQ14761 206 aa8.79□□□□□ -1
FN1-227ENST00000498719 RAB30Q15771 203 aa8.79□□□□□ -1
FN1-227ENST00000498719 C6orf52Q5T4I8 152 aa8.79□□□□□ -1
FN1-227ENST00000498719 KIAA0930Q6ICG6 404 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 TMEM207Q6UWW9 146 aa8.79□□□□□ -1
FN1-227ENST00000498719 LAYNQ6UX15 382 aa8.79□□□□□ -1
FN1-227ENST00000498719 IKBIPQ70UQ0 350 aa8.79□□□□□ -1
FN1-227ENST00000498719 PIWIL4Q7Z3Z4 852 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 METTL23Q86XA0 190 aa8.79□□□□□ -1
FN1-227ENST00000498719 PELI3Q8N2H9 469 aa8.79□□□□□ -1
FN1-227ENST00000498719 TRPV1Q8NER1 839 aa8.79□□□□□ -1
FN1-227ENST00000498719 OR13J1Q8NGT2 312 aa8.79□□□□□ -1
FN1-227ENST00000498719 FIBINQ8TAL6 211 aa8.79□□□□□ -1
FN1-227ENST00000498719 NXPE3Q969Y0 559 aa8.79□□□□□ -1
FN1-227ENST00000498719 CNBD2Q96M20 576 aa8.79□□□□□ -1
FN1-227ENST00000498719 CITED2Q99967 270 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 TCF25Q9BQ70 676 aa8.79□□□□□ -1
FN1-227ENST00000498719 CCDC28BQ9BUN5 200 aa8.79□□□□□ -1
FN1-227ENST00000498719 SEMA6AQ9H2E6 1030 aa8.79□□□□□ -1
FN1-227ENST00000498719 SMOC2Q9H3U7 446 aa8.79□□□□□ -1
FN1-227ENST00000498719 FBRSL1Q9HCM7 1045 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 GMPR2Q9P2T1 348 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 APPL1Q9UKG1 709 aa8.79□□□□□ -1
FN1-227ENST00000498719 CROCCQ5TZA2 2017 aa8.79□□□□□ -1
FN1-227ENST00000498719 A0A1B0GVG6 124 aa8.79□□□□□ -1
FN1-227ENST00000498719 E7ENX8 843 aa8.79□□□□□ -1
FN1-227ENST00000498719 SLCO1B7G3V0H7 640 aa8.79□□□□□ -1
FN1-227ENST00000498719 FBP2O00757 339 aa8.79□□□□□ -1
FN1-227ENST00000498719 SCAMP1O15126 338 aa8.79□□□□□ -1
FN1-227ENST00000498719 FGF10O15520 208 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 PEX1O43933 1283 aa8.79□□□□□ -1
FN1-227ENST00000498719 NPHS1O60500 1241 aa8.79□□□□□ -1
FN1-227ENST00000498719 TADA2AO75478 443 aa8.79□□□□□ -1
FN1-227ENST00000498719 IPO13O94829 963 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 LAMP2P13473 410 aa8.79□□□□□ -1
FN1-227ENST00000498719 CCNA2P20248 432 aa8.79□□□□□ -1
FN1-227ENST00000498719 CST5P28325 142 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 GRK4P32298 578 aa8.79□□□□□ -1
FN1-227ENST00000498719 CDKN2DP55273 166 aa8.79□□□□□ -1
FN1-227ENST00000498719 ACTR1AP61163 376 aa8.79□□□□□ -1
FN1-227ENST00000498719 PHC1P78364 1004 aa8.79□□□□□ -1
FN1-227ENST00000498719 XIAPP98170 497 aa8.79□□□□□ -1
FN1-227ENST00000498719 POU4F1Q01851 419 aa8.79□□□□□ -1
FN1-227ENST00000498719 CAMK2DQ13557 499 aa8.79□□□□□ -1
FN1-227ENST00000498719 FAM83EQ2M2I3 478 aa8.79□□□□□ -1
FN1-227ENST00000498719 C3orf38Q5JPI3 329 aa8.79□□□□□ -1
FN1-227ENST00000498719 BRMS1LQ5PSV4 323 aa8.79□□□□□ -1
FN1-227ENST00000498719 ZNF697Q5TEC3 545 aa8.79□□□□□ -1
FN1-227ENST00000498719 IL23RQ5VWK5 629 aa8.79□□□□□ -1
FN1-227ENST00000498719 CUZD1Q86UP6 607 aa8.79□□□□□ -1
FN1-227ENST00000498719 CIR1Q86X95 450 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
FN1-227ENST00000498719 RTL3Q8N8U3 475 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 PDCD6IPQ8WUM4 868 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 EXT2Q93063 718 aa8.79□□□□□ -1
FN1-227ENST00000498719 HMCESQ96FZ2 354 aa8.79□□□□□ -1
FN1-227ENST00000498719 PDLIM5Q96HC4 596 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 BTBD9Q96Q07 612 aa8.79□□□□□ -1
FN1-227ENST00000498719 CENPKQ9BS16 269 aa8.79□□□□□ -1
FN1-227ENST00000498719 PRR14Q9BWN1 585 aa8.79□□□□□ -1
FN1-227ENST00000498719 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
FN1-227ENST00000498719 PCED1AQ9H1Q7 454 aa8.79□□□□□ -1
FN1-227ENST00000498719 ALG9Q9H6U8 611 aa8.79□□□□□ -1
FN1-227ENST00000498719 MARCH4Q9P2E8 410 aaPredicted RBP8.79□□□□□ -1
FN1-227ENST00000498719 PCDHGA5Q9Y5G8 931 aa8.79□□□□□ -1
FN1-227ENST00000498719 PCDHGA1Q9Y5H4 931 aa8.79□□□□□ -1
FN1-227ENST00000498719 AP4B1Q9Y6B7 739 aa8.79□□□□□ -1
FN1-227ENST00000498719 A0A087X1B8 175 aa8.78□□□□□ -1
FN1-227ENST00000498719 A0A1W2PQ09 198 aa8.78□□□□□ -1
FN1-227ENST00000498719 ARNTLO00327 626 aa8.78□□□□□ -1
FN1-227ENST00000498719 PPP6CO00743 305 aa8.78□□□□□ -1
FN1-227ENST00000498719 NOL3O60936 208 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 NPPAP01160 153 aa8.78□□□□□ -1
FN1-227ENST00000498719 ASGR1P07306 291 aa8.78□□□□□ -1
FN1-227ENST00000498719 SPATA31D3P0C874 917 aa8.78□□□□□ -1
FN1-227ENST00000498719 SMIM18P0DKX4 95 aa8.78□□□□□ -1
FN1-227ENST00000498719 FGFR3P22607 806 aa8.78□□□□□ -1
FN1-227ENST00000498719 CYP2C18P33260 490 aa8.78□□□□□ -1
FN1-227ENST00000498719 HK2P52789 917 aa8.78□□□□□ -1
FN1-227ENST00000498719 CDH13P55290 713 aa8.78□□□□□ -1
FN1-227ENST00000498719 FAM189BP81408 668 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms