RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 STK19P49842 368 aaPredicted RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 LIG3P49916 1009 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 ARSEP51690 589 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 EPHB1P54762 984 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 TPI1P60174 286 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 ID3Q02535 119 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RBPJQ06330 500 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 AUHQ13825 339 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 DOC2BQ14184 412 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 PRKD1Q15139 912 aaPredicted RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 DPYSL2Q16555 572 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 CA9Q16790 459 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 MS4A13Q5J8X5 152 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 DNTTIP2Q5QJE6 756 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 SNAP47Q5SQN1 464 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 ADGRF1Q5T601 910 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 PIK3R6Q5UE93 754 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RAP1GAP2Q684P5 730 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 NADSYN1Q6IA69 706 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RWDD4Q6NW29 188 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 FBXL22Q6P050 247 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 MFSD7Q6UXD7 560 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 SPOCD1Q6ZMY3 1216 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 CYP4V2Q6ZWL3 525 aaPredicted RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 VSIG1Q86XK7 387 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RFX6Q8HWS3 928 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 HID1Q8IV36 788 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 PYROXD2Q8N2H3 581 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 GALNT16Q8N428 558 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 KIF18AQ8NI77 898 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 DNAJB14Q8TBM8 379 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 FRS2Q8WU20 508 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RAPGEF5Q92565 580 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 ALG3Q92685 438 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 TSACCQ96A04 125 aaPredicted RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 TBC1D31Q96DN5 1066 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 MRRFQ96E11 262 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 SGSM3Q96HU1 749 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 FAM46AQ96IP4 442 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 PBKQ96KB5 322 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 CNDP1Q96KN2 507 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RPRD1AQ96P16 312 aaPredicted RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 FCRL4Q96PJ5 515 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 PSMB7Q99436 277 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 PRMT1Q99873 361 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 DPYSL5Q9BPU6 564 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 NDC1Q9BTX1 674 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 SSBP4Q9BWG4 385 aaPredicted RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 MAK16Q9BXY0 300 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 MAGEB5Q9BZ81 275 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 CATSPERBQ9H7T0 1116 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 TPSG1Q9NRR2 321 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 XPO7Q9UIA9 1087 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 LNPEPQ9UIQ6 1025 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 STOML2Q9UJZ1 356 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 SNX12Q9UMY4 172 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 WBP11Q9Y2W2 641 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 SNX10Q9Y5X0 201 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 SAR1BQ9Y6B6 198 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 FREM1Q5H8C1 2179 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 hCG_1818297A0A087WSY0 165 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 C3orf70A6NLC5 250 aaPredicted RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 RHPN2P1A8MT19 583 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 A8MV72 311 aaPredicted RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 IDSB3KWA1 339 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 FAM72CH0Y354 149 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 I6L893 689 aaPredicted RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 CES2O00748 559 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 FGF10O15520 208 aaPredicted RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 PRAMEF2O60811 474 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 TBL1XO60907 577 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 URI1O94763 535 aaPredicted RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 LRIG2O94898 1065 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 SOX30O94993 753 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 PCDH8O95206 1070 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 MATN4O95460 622 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 ECEL1O95672 775 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 CTSLP07711 333 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 SRPRAP08240 638 aaKnown RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 CD48P09326 243 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 H2AFB1P0C5Y9 115 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 H2AFB2P0C5Z0 115 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 CTSEP14091 401 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 ZFXP17010 805 aaPredicted RBP5.05□□□□□ -1.6
FXN-205ENST00000498653 IDSP22304 550 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 EPHB2P29323 1055 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 CXCR5P32302 372 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 PTPN7P35236 360 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 CDKN2BP42772 138 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 PAFAH1B1P43034 410 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 GPR3P46089 330 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 PREPP48147 710 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 BLKP51451 505 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 COL10A1Q03692 680 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 TUBB2AQ13885 445 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 TFDP2Q14188 446 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 DPYSL3Q14195 570 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 INPP5AQ14642 412 aa5.05□□□□□ -1.6
FXN-205ENST00000498653 SEPT7Q16181 437 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms