RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CDHR4A6H8M9 788 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LGALS16A8MUM7 142 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 C16orf97H3BN30 126 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 K7EPK0 472 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HRKO00198 91 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PRKNO60260 465 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 SCGB2A1O75556 95 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PRKRAO75569 313 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 GCM2O75603 506 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 STBD1O95210 358 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LRATO95237 230 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 IGKV1-5P01602 117 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CHRM4P08173 479 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TNNI1P19237 187 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GZMHP20718 246 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PPP2R1AP30153 589 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CALCRP30988 508 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 RGRP47804 291 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LMAN1P49257 510 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ACADVLP49748 655 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 NR1H2P55055 460 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MAP3K7CLP57077 242 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ADAM15Q13444 863 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PDE1CQ14123 709 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 MORF4L2Q15014 288 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DLGAP5Q15398 846 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TEAD2Q15562 447 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZSWIM7Q19AV6 140 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TTC31Q49AM3 519 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 FNDC3BQ53EP0 1204 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 LCE1DQ5T752 114 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 NUGGCQ68CJ6 796 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GALNT17Q6IS24 598 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CWC27Q6UX04 472 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 PTCHD4Q6ZW05 846 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 KDELC2Q7Z4H8 507 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 UBALD2Q8IYN6 164 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 IQCKQ8N0W5 287 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FAM71E2Q8N5Q1 922 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SLC5A8Q8N695 610 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 OR6S1Q8NH40 331 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 EXOC6Q8TAG9 804 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SMARCD2Q92925 531 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF503Q96F45 646 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PGM2Q96G03 612 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TIMD4Q96H15 378 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 VPS39Q96JC1 886 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CNBD2Q96M20 576 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 XPO6Q96QU8 1125 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 OR52B2Q96RD2 323 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MMP19Q99542 508 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FAIM2Q9BWQ8 316 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 POTEKPQ9BYX7 375 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GBP3Q9H0R5 595 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GAL3ST2Q9H3Q3 398 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 AGO3Q9H9G7 860 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 AP5S1Q9NUS5 200 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CTSFQ9UBX1 484 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZHX1Q9UKY1 873 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.41□□□□□ -2.18
XRN1-214ENST00000498077 TMED3Q9Y3Q3 217 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TDRD6O60522 2096 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 TEX48A0A1B0GUV7 120 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TMEM269A0A1B0GVZ9 245 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 CGB1A6NKQ9 187 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 OR52A4PA6NMU1 304 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 A8MXK9 166 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TCP11X1B4DZS4 312 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 LPXNO60711 386 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 KHDRBS3O75525 346 aaKnown RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 AIFM1O95831 613 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 GPANK1O95872 356 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 USP17L7P0C7H9 530 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 UGT2B7P16662 529 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 PRKACGP22612 351 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 MYF6P23409 242 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 PSMA5P28066 241 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 CD38P28907 300 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 NUP62P37198 522 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 GRIA3P42263 894 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 EIF1AXP47813 144 aaKnown RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 OAZ1P54368 228 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 EPHB4P54760 987 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 PSMD4P55036 377 aaKnown RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 TMEM258P61165 79 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 OSTNP61366 133 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 AP1S1P61966 158 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 KLHL30Q0D2K2 578 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TRAF3Q13114 568 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 CHIT1Q13231 466 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 HDAC1Q13547 482 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 IDI1Q13907 227 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 KCNJ11Q14654 390 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 NONOQ15233 471 aaKnown RBP eCLIP1.4□□□□□ -2.18
XRN1-214ENST00000498077 PPP1R7Q15435 360 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 NSDHLQ15738 373 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 KRT24Q2M2I5 525 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 SPRED3Q2MJR0 410 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 MGAT5BQ3V5L5 792 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 RNASEH2BQ5TBB1 312 aaKnown RBP1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms