RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GH2P01242 217 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 PON1P27169 355 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 MAGEA11P43364 429 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 DRP2Q13474 957 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 NECTIN1Q15223 517 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 MEP1AQ16819 746 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 SGSM1Q2NKQ1 1148 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 TAF1BQ53T94 588 aaPredicted RBP3.19□□□□□ -1.9
SMC4-227ENST00000497984 DCAF10Q5QP82 559 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 SLC25A30Q5SVS4 291 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 HAUS3Q68CZ6 603 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 IKBIPQ70UQ0 350 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 C11orf53Q8IXP5 236 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 ADGRF2Q8IZF7 708 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 LSMEM2Q8N112 164 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 TEX19Q8NA77 164 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 GSDMBQ8TAX9 411 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 NSMCE3Q96MG7 304 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 TRIM6Q9C030 488 aaPredicted RBP3.19□□□□□ -1.9
SMC4-227ENST00000497984 KRT84Q9NSB2 600 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.19□□□□□ -1.9
SMC4-227ENST00000497984 ITIH6Q6UXX5 1313 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 MSGN1A6NI15 193 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 SOCS3O14543 225 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 RTL8CO15255 209 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 NDUFS4O43181 175 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 H1F0P07305 194 aaKnown RBP3.18□□□□□ -1.9
SMC4-227ENST00000497984 ACP2P11117 423 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 RARGP13631 454 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 GABRB1P18505 474 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 PGFP49763 221 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 CDH8P55286 799 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 RPS18P62269 152 aaKnown RBP3.18□□□□□ -1.9
SMC4-227ENST00000497984 IKQ13123 557 aaPredicted RBP3.18□□□□□ -1.9
SMC4-227ENST00000497984 KLC3Q6P597 504 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 PIGZQ86VD9 579 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 GALNT13Q8IUC8 556 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 WDTC1Q8N5D0 677 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 SOSTQ9BQB4 213 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 RAB11FIP5Q9BXF6 653 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 DENND2DQ9H6A0 471 aaPredicted RBP3.18□□□□□ -1.9
SMC4-227ENST00000497984 SLA2Q9H6Q3 261 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 FBXL17Q9UF56 701 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 AMACRQ9UHK6 382 aa3.18□□□□□ -1.9
SMC4-227ENST00000497984 IGHV3OR16-10A0A075B7F0 116 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 KPNA7A9QM74 516 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 RB1P06400 928 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 GPIP06744 558 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 PSMB10P40306 273 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 ARF3P61204 181 aaPredicted RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 ARF1P84077 181 aaKnown RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 MS4A2Q01362 244 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 ELAVL2Q12926 359 aaKnown RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 CORO6Q6QEF8 472 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 CHST9Q7L1S5 443 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 OR2L2Q8NH16 312 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 OR4C3Q8NH37 302 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 SUSD6Q92537 303 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 GTF3AQ92664 365 aaKnown RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 MYADMQ96S97 322 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 GAD1Q99259 594 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 KRT12Q99456 494 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 NAP1L4Q99733 375 aaKnown RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 FUCA2Q9BTY2 467 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 UPF3AQ9H1J1 476 aaKnown RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 ACKR4Q9NPB9 350 aa3.17□□□□□ -1.9
SMC4-227ENST00000497984 SOS1Q07889 1333 aaPredicted RBP3.17□□□□□ -1.9
SMC4-227ENST00000497984 RUSC2Q8N2Y8 1516 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 IGLV3-10A0A075B6K4 115 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 A0A1W2PR77 199 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 TPPPO94811 219 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 LIMK2P53671 638 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 GSCP56915 257 aaPredicted RBP3.16□□□□□ -1.9
SMC4-227ENST00000497984 NFATC2Q13469 925 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 KIAA0930Q6ICG6 404 aaPredicted RBP3.16□□□□□ -1.9
SMC4-227ENST00000497984 LINGO4Q6UY18 593 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 Q6ZRP5 223 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 MAATS1Q7Z4T9 603 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 ZNF554Q86TJ5 538 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 ZNF584Q8IVC4 421 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 SCYL3Q8IZE3 742 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 RAB42Q8N4Z0 105 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 KBTBD8Q8NFY9 601 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 OR1J1Q8NGS3 322 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 DYRK2Q92630 601 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 ZNF582Q96NG8 517 aaPredicted RBP3.16□□□□□ -1.9
SMC4-227ENST00000497984 TREX2Q9BQ50 279 aaPredicted RBP3.16□□□□□ -1.9
SMC4-227ENST00000497984 HGH1Q9BTY7 390 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 ZHX3Q9H4I2 956 aa3.16□□□□□ -1.9
SMC4-227ENST00000497984 EIF2B3Q9NR50 452 aaKnown RBP3.16□□□□□ -1.9
SMC4-227ENST00000497984 KLF11O14901 512 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 BCL2L11O43521 198 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 MITFO75030 526 aaPredicted RBP3.15□□□□□ -1.91
SMC4-227ENST00000497984 PTP4A3O75365 173 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 DUX4L4P0CJ87 422 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 PRLRP16471 622 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 EFNA1P20827 205 aaPredicted RBP3.15□□□□□ -1.91
SMC4-227ENST00000497984 CDC25CP30307 473 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 RXRGP48443 463 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 KCNC3Q14003 757 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms