RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TMEM184BQ9Y519 407 aaPredicted RBP14.93□□□□□ -0.02
NUP50-219ENST00000497960 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
NUP50-219ENST00000497960 PRSS21Q9Y6M0 314 aa14.93□□□□□ -0.02
NUP50-219ENST00000497960 MGAQ8IWI9 3026 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 TLCD2A6NGC4 264 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 AVILO75366 819 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 PDHA2P29803 388 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 ARL4CP56559 192 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 PLOD1Q02809 727 aaPredicted RBP14.92□□□□□ -0.02
NUP50-219ENST00000497960 GUCY2DQ02846 1103 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 ZNF658BQ4V348 819 aaPredicted RBP14.92□□□□□ -0.02
NUP50-219ENST00000497960 SYTL3Q4VX76 610 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 GLE1Q53GS7 698 aaKnown RBP14.92□□□□□ -0.02
NUP50-219ENST00000497960 TEX35Q5T0J7 233 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 CAND1Q86VP6 1230 aaKnown RBP14.92□□□□□ -0.02
NUP50-219ENST00000497960 RASGRP3Q8IV61 690 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 ESX1Q8N693 406 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 LRRN4CLQ8ND94 238 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 TFGQ92734 400 aaPredicted RBP14.92□□□□□ -0.02
NUP50-219ENST00000497960 SGSM3Q96HU1 749 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 SLC41A2Q96JW4 573 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 EFHD1Q9BUP0 239 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 TSSK1BQ9BXA7 367 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 ULBP3Q9BZM4 244 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 SPRY4Q9C004 299 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 GPN2Q9H9Y4 310 aaPredicted RBP14.92□□□□□ -0.02
NUP50-219ENST00000497960 PDE7BQ9NP56 450 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 CHRAC1Q9NRG0 131 aa14.92□□□□□ -0.02
NUP50-219ENST00000497960 IGHV5-51A0A0C4DH38 117 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 ESYT3A0FGR9 886 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 MATN2O00339 956 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 OR1I1O60431 355 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 LIFP15018 202 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 POLR2CP19387 275 aaPredicted RBP14.91□□□□□ -0.02
NUP50-219ENST00000497960 ACY1Q03154 408 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 HIF1AQ16665 826 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 PCSK4Q6UW60 755 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 PPP1R3BQ86XI6 285 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 PDIK1LQ8N165 341 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 CARFQ8N187 725 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 MPP5Q8N3R9 675 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 PHC3Q8NDX5 983 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 ELMO2Q96JJ3 720 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 CATSPERZQ9NTU4 200 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 RARRES3Q9UL19 164 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 MAD1L1Q9Y6D9 718 aa14.91□□□□□ -0.02
NUP50-219ENST00000497960 GSAPA4D1B5 854 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 ZBTB11O95625 1053 aaPredicted RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 DLGAP3O95886 979 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 PRB1P04280 392 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 ITGB2P05107 769 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 RHOXF2BP0C7M4 288 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 FGF5P12034 268 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 WT1P19544 449 aaPredicted RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 MAGEA3P43357 314 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 ARCN1P48444 511 aaKnown RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 TTPAP49638 278 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 HSD11B2P80365 405 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 CAV1Q03135 178 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 ABHD18Q0P651 414 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 C19orf57Q0VDD7 668 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 TUBB3Q13509 450 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 BOP1Q14137 746 aaKnown RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 MAP7Q14244 749 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 BRD3Q15059 726 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 BBS9Q3SYG4 887 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
NUP50-219ENST00000497960 TMTC4Q5T4D3 741 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 C6orf15Q6UXA7 325 aaPredicted RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 TIPARPQ7Z3E1 657 aaKnown RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 BPHLQ86WA6 291 aaPredicted RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 RHOXF2Q9BQY4 288 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 ARHGAP9Q9BRR9 750 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 HGH1Q9BTY7 390 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 TFB2MQ9H5Q4 396 aaKnown RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 MRM3Q9HC36 420 aaKnown RBP14.9□□□□□ -0.02
NUP50-219ENST00000497960 FAM114A2Q9NRY5 505 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 TREX1Q9NSU2 369 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 LNPEPQ9UIQ6 1025 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 ASF1AQ9Y294 204 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 COL6A6A6NMZ7 2263 aa14.9□□□□□ -0.02
NUP50-219ENST00000497960 SDR42E2A6NKP2 422 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 ZNF891A8MT65 544 aaPredicted RBP14.89□□□□□ -0.03
NUP50-219ENST00000497960 CD3EAPO15446 510 aaKnown RBP14.89□□□□□ -0.03
NUP50-219ENST00000497960 BANF1O75531 89 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 SPAG6O75602 509 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 KIAA0754O94854 1291 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 SLU7O95391 586 aaKnown RBP14.89□□□□□ -0.03
NUP50-219ENST00000497960 FOLR1P15328 257 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 PAMP19021 973 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 CDH3P22223 829 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 KPNA2P52292 529 aaKnown RBP14.89□□□□□ -0.03
NUP50-219ENST00000497960 PLTPP55058 493 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 PRKG2Q13237 762 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 SEMA3AQ14563 771 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 KCNAB1Q14722 419 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 AMIGO1Q86WK6 493 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms