RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 EIF3BP55884 814 aaKnown RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 SH3BP2P78314 561 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 THOC5Q13769 683 aaKnown RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 PTK6Q13882 451 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 TTC23LQ6PF05 361 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 NAPRTQ6XQN6 538 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 OTOAQ7RTW8 1153 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 SLC22A15Q8IZD6 547 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 ESX1Q8N693 406 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 NAT8LQ8N9F0 302 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 LSM14AQ8ND56 463 aaKnown RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 OR5AR1Q8NGP9 310 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 GABPB2Q8TAK5 448 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 ZNF669Q96BR6 464 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 FANCEQ9HB96 536 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 C1GALT1Q9NS00 363 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 POMT2Q9UKY4 750 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 TDRKHQ9Y2W6 561 aaKnown RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 MRFAP1Q9Y605 127 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 RPS6KL1Q9Y6S9 549 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 FAM208BQ5VWN6 2430 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 NBEAQ8NFP9 2946 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 BHMG1C9JSJ3 638 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-211ENST00000494800 EFSO43281 561 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 ESR1P03372 595 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 MT-ND3P03897 115 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 FGF5P12034 268 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 AOAHP28039 575 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
HDAC4-211ENST00000494800 KPNA2P52292 529 aaKnown RBP17.13■□□□□ 0.33
HDAC4-211ENST00000494800 MAP7Q14244 749 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 TYSND1Q2T9J0 566 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 ANKRD20A4Q4UJ75 823 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 TAF1BQ53T94 588 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-211ENST00000494800 NEPROQ6NW34 567 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 OR8K5Q8NH50 307 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 STAMBPL1Q96FJ0 436 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 ELMO2Q96JJ3 720 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 FCRL4Q96PJ5 515 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 P2RY12Q9H244 342 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 OR6C2Q9NZP2 312 aa17.13■□□□□ 0.33
HDAC4-211ENST00000494800 IQCF5A8MTL0 148 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 GOLGA8KD6RF30 607 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 GOLGA8TH3BQL2 631 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 CCDC188H7C350 402 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 BTN3A1O00481 513 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 DNALI1O14645 258 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 GPC4O75487 556 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 USP1O94782 785 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 CCNYL3P0C7X3 344 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 ARNTP27540 789 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 PRDX3P30048 256 aaKnown RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 FMO4P31512 558 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 TUBB4BP68371 445 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 DR1Q01658 176 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 ABHD18Q0P651 414 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 TUBB2AQ13885 445 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 RNASEH2BQ5TBB1 312 aaKnown RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 C6orf15Q6UXA7 325 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 UNC5DQ6UXZ4 953 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 TMEM135Q86UB9 458 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 CREG2Q8IUH2 290 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 KLHL7Q8IXQ5 586 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 LMNTD2Q8IXW0 634 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 D2HGDHQ8N465 521 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 CALML6Q8TD86 181 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 SKA2Q8WVK7 121 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 TUBB2BQ9BVA1 445 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 XKR8Q9H6D3 395 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 GPN2Q9H9Y4 310 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 SYTL2Q9HCH5 934 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 FGF21Q9NSA1 209 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 INTS10Q9NVR2 710 aaKnown RBP17.12■□□□□ 0.33
HDAC4-211ENST00000494800 LNPEPQ9UIQ6 1025 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 PCDHGA4Q9Y5G9 962 aa17.12■□□□□ 0.33
HDAC4-211ENST00000494800 PIPSLA2A3N6 862 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 E5RI56 91 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 TK2O00142 265 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 SMAPO00193 183 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 BTN3A3O00478 584 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 SPAG6O75602 509 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 SLCO2B1O94956 709 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 DLGAP3O95886 979 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 EBLN1P0CF75 366 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 FOLR1P15328 257 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 MAGEA3P43357 314 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 KCNAB1Q14722 419 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 PLEKHS1Q5SXH7 462 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 IZUMO3Q5VZ72 239 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 ZNF470Q6ECI4 717 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 CILP2Q8IUL8 1156 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 DCUN1D3Q8IWE4 304 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 CFAP61Q8NHU2 1237 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms