RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PPP1CAP62136 330 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 VRK3Q8IV63 474 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 FAM136AQ96C01 138 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 LRRC39Q96DD0 335 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 BIRC8Q96P09 236 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 RAB17Q9H0T7 212 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 TFB2MQ9H5Q4 396 aaKnown RBP15.5■□□□□ 0.07
LIME1-209ENST00000494776 FBXO5Q9UKT4 447 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 FAM208BQ5VWN6 2430 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 KIF26BQ2KJY2 2108 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 PIKFYVEQ9Y2I7 2098 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 A0A087WV48 116 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 B4E171 279 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 MATN2O00339 956 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 SLCO2B1O94956 709 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 F7P08709 466 aaPredicted RBP15.49■□□□□ 0.07
LIME1-209ENST00000494776 TSPAN7P41732 249 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ABCG1P45844 678 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 RAB15P59190 212 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 FOXM1Q08050 763 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 PDIA2Q13087 525 aaKnown RBP15.49■□□□□ 0.07
LIME1-209ENST00000494776 WHAMMP3Q1A5X7 153 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ZNF789Q5FWF6 425 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 PLEKHS1Q5SXH7 462 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 DCAF12Q5T6F0 453 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 TTC23LQ6PF05 361 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ZNF572Q7Z3I7 529 aaPredicted RBP15.49■□□□□ 0.07
LIME1-209ENST00000494776 PRSS42Q7Z5A4 293 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 AMIGO1Q86WK6 493 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ANKMY2Q8IV38 441 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 IGDCC3Q8IVU1 814 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 UNC5BQ8IZJ1 945 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 OR5K2Q8NHB8 316 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 UBXN4Q92575 508 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 FOPNLQ96NB1 174 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 CD180Q99467 661 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 MAP3K3Q99759 626 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ASPSCR1Q9BZE9 553 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ZNF768Q9H5H4 540 aaKnown RBP15.49■□□□□ 0.07
LIME1-209ENST00000494776 XKR8Q9H6D3 395 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 WHRNQ9P202 907 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 TSR3Q9UJK0 312 aaKnown RBP15.49■□□□□ 0.07
LIME1-209ENST00000494776 CDYLQ9Y232 598 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 ACACAQ13085 2346 aa15.49■□□□□ 0.07
LIME1-209ENST00000494776 FREM2Q5SZK8 3169 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 WDFY3Q8IZQ1 3526 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 TLCD2A6NGC4 264 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 C9orf172C9J069 976 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 POLR1CO15160 346 aaPredicted RBP15.48■□□□□ 0.07
LIME1-209ENST00000494776 KLK10O43240 276 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 SHMT2P34897 504 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 MPP1Q00013 466 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 MC2RQ01718 297 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 BROXQ5VW32 411 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 ANKS6Q68DC2 871 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 C19orf48Q6RUI8 117 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 CEACAM20Q6UY09 585 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 UNC5AQ6ZN44 842 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 ZBTB2Q8N680 514 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 SIDT2Q8NBJ9 832 aaKnown RBP15.48■□□□□ 0.07
LIME1-209ENST00000494776 FBXO36Q8NEA4 188 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 CERS2Q96G23 380 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 CTRCQ99895 268 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 DDA1Q9BW61 102 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 DPH1Q9BZG8 443 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 B3GNT4Q9C0J1 378 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 FBXO8Q9NRD0 319 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 FOXJ2Q9P0K8 574 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 PCDHB11Q9Y5F2 797 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 MRFAP1Q9Y605 127 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 TEX264Q9Y6I9 313 aa15.48■□□□□ 0.07
LIME1-209ENST00000494776 IGHV5-51A0A0C4DH38 117 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 C2orf74A8MZ97 194 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 BTN3A1O00481 513 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 HAUS5O94927 633 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 CDH3P22223 829 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 CD82P27701 267 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 ITPKBP27987 946 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 CARSP49589 748 aaKnown RBP15.47■□□□□ 0.07
LIME1-209ENST00000494776 TTLL9Q3SXZ7 439 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 DUPD1Q68J44 220 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 C8orf74Q6P047 294 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 CNSTQ6PJW8 725 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 UNC5DQ6UXZ4 953 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 ZFAND4Q86XD8 727 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 SPACA3Q8IXA5 215 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 ZBED8Q8IZ13 594 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 C2CD4AQ8NCU7 369 aaPredicted RBP15.47■□□□□ 0.07
LIME1-209ENST00000494776 MNS1Q8NEH6 495 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 KLHL6Q8WZ60 621 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 TEFMQ96QE5 360 aaKnown RBP15.47■□□□□ 0.07
LIME1-209ENST00000494776 PLAGL1Q9UM63 463 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 ICKQ9UPZ9 632 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 PCDHGA3Q9Y5H0 932 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 B3GALT1Q9Y5Z6 326 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 COMMD10Q9Y6G5 202 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 CHD6Q8TD26 2715 aa15.47■□□□□ 0.07
LIME1-209ENST00000494776 ANKRD11Q6UB99 2663 aaPredicted RBP15.47■□□□□ 0.07
LIME1-209ENST00000494776 CFAP47Q6ZTR5 3102 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 PIPSLA2A3N6 862 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms