RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 HSPA14Q0VDF9 509 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 GPR19Q15760 415 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 CYP1B1Q16678 543 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 ANKRD22Q5VYY1 191 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 PWWP2BQ6NUJ5 590 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 TBC1D21Q8IYX1 336 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 LKAAEAR1Q8TD35 194 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 MED8Q96G25 268 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 MRM3Q9HC36 420 aaKnown RBP32.23■■■□□ 2.75
CBX4-203ENST00000494546 C1GALT1Q9NS00 363 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 ICKQ9UPZ9 632 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 TDRKHQ9Y2W6 561 aaKnown RBP32.23■■■□□ 2.75
CBX4-203ENST00000494546 PRMT5O14744 637 aaPredicted RBP32.22■■■□□ 2.75
CBX4-203ENST00000494546 AVILO75366 819 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 TUBB4BP68371 445 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 TUBB2AQ13885 445 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 BPHLQ86WA6 291 aaPredicted RBP32.22■■■□□ 2.75
CBX4-203ENST00000494546 KRT222Q8N1A0 295 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 EXD3Q8N9H8 876 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 TUBB2BQ9BVA1 445 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 CARD6Q9BX69 1037 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 SOX13Q9UN79 622 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 BTRCQ9Y297 605 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 ATRXP46100 2492 aa32.22■■■□□ 2.75
CBX4-203ENST00000494546 C2orf74A8MZ97 194 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 NKX2-8O15522 239 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 NDUFS3O75489 264 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 VAPBO95292 243 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 DLSTP36957 453 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 MAGEA6P43360 314 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 PTRHD1Q6GMV3 140 aaKnown RBP32.21■■■□□ 2.75
CBX4-203ENST00000494546 ADGRF3Q8IZF5 1079 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 FCRL4Q96PJ5 515 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 ACTR10Q9NZ32 417 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 POLG2Q9UHN1 485 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 CROTQ9UKG9 612 aa32.21■■■□□ 2.75
CBX4-203ENST00000494546 CCNYL3P0C7X3 344 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 PRKAR1AP10644 381 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 ARNTP27540 789 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 CASC4Q6P4E1 433 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 VRK3Q8IV63 474 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 MPP5Q8N3R9 675 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 OR5K2Q8NHB8 316 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 ACTRT1Q8TDG2 376 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 ASZ1Q8WWH4 475 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 STARD8Q92502 1023 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 CPT1BQ92523 772 aa32.2■■■□□ 2.75
CBX4-203ENST00000494546 ANP32BQ92688 251 aaKnown RBP32.2■■■□□ 2.75
CBX4-203ENST00000494546 MRPS18BQ9Y676 258 aaKnown RBP32.2■■■□□ 2.75
CBX4-203ENST00000494546 GOLGA8KD6RF30 607 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 GOLGA8TH3BQL2 631 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 TMEM63AO94886 807 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 MT-ND3P03897 115 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 NTRK1P04629 796 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 APOA4P06727 396 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 FAM87AP0C7U9 286 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 SHMT2P34897 504 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 UNC5AQ6ZN44 842 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 SLC22A15Q8IZD6 547 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 KLHL25Q9H0H3 589 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 KCND1Q9NSA2 647 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 GNPTGQ9UJJ9 305 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 PADI1Q9ULC6 663 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 PLAGL1Q9UM63 463 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 SNX12Q9UMY4 172 aa32.19■■■□□ 2.74
CBX4-203ENST00000494546 GOLGA6L10A0A0M3HER8 536 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 ZNF185O15231 689 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 PHF2O75151 1096 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 ST6GAL1P15907 406 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 F8A1P23610 371 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 MRNIPQ6NTE8 343 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 C16orf46Q6P387 395 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 SDCCAG8Q86SQ7 713 aaPredicted RBP32.18■■■□□ 2.74
CBX4-203ENST00000494546 CAND1Q86VP6 1230 aaKnown RBP32.18■■■□□ 2.74
CBX4-203ENST00000494546 TMEM126BQ8IUX1 230 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 CFAP61Q8NHU2 1237 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 ZNF501Q96CX3 271 aaPredicted RBP32.18■■■□□ 2.74
CBX4-203ENST00000494546 P2RY12Q9H244 342 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 FANCEQ9HB96 536 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 CDYLQ9Y232 598 aa32.18■■■□□ 2.74
CBX4-203ENST00000494546 PIPSLA2A3N6 862 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 GOLGA8MH3BSY2 632 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 PVRP15151 417 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 AOAHP28039 575 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 EIF3BP55884 814 aaKnown RBP32.17■■■□□ 2.74
CBX4-203ENST00000494546 CDC20Q12834 499 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 TMED2Q15363 201 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 DNAJC21Q5F1R6 531 aaKnown RBP32.17■■■□□ 2.74
CBX4-203ENST00000494546 BORAQ6PGQ7 559 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 HOOK3Q86VS8 718 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 PANX3Q96QZ0 392 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 PITPNM3Q9BZ71 974 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 LHX9Q9NQ69 397 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 SAMD15Q9P1V8 674 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 NEU2Q9Y3R4 380 aa32.17■■■□□ 2.74
CBX4-203ENST00000494546 MAP3K7O43318 606 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 KATNA1O75449 491 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 GPC4O75487 556 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 SCRG1O75711 98 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 TPBGLP0DKB5 382 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms