RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 RTP5Q14D33 572 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 SNAP47Q5SQN1 464 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 UNC5DQ6UXZ4 953 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 ARHGAP22Q7Z5H3 698 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 STRA8Q7Z7C7 330 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 SLC26A11Q86WA9 606 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 RELL1Q8IUW5 271 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 WDR36Q8NI36 951 aaKnown RBP13.17□□□□□ -0.3
COL1A1-208ENST00000494334 CD200R1Q8TD46 325 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 CDKL2Q92772 493 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 INPP5DQ92835 1189 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 FMO2Q99518 471 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 STRADBQ9C0K7 418 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 HRASLS2Q9NWW9 162 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 NSMCE4AQ9NXX6 385 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 KLHL3Q9UH77 587 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 POLG2Q9UHN1 485 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 SATB2Q9UPW6 733 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 TDRKHQ9Y2W6 561 aaKnown RBP13.17□□□□□ -0.3
COL1A1-208ENST00000494334 MN1Q10571 1320 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 OR6C74A6NCV1 312 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 A8MU76 341 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 AGRPO00253 132 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 CD9P21926 228 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 ATP5DP30049 168 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 LSSP48449 732 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 CDKN2DP55273 166 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 PPP1CAP62136 330 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 EIF3IQ13347 325 aaKnown RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 GRB7Q14451 532 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 C16orf72Q14CZ0 275 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 KYNUQ16719 465 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 KLHL38Q2WGJ6 581 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 UGT3A1Q6NUS8 523 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 KLHL35Q6PF15 583 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 UNQ6494/PRO21346Q6UXR6 183 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 CYHR1Q6ZMK1 362 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 RAB11FIP2Q7L804 512 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 OOSP2Q86WS3 158 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 FBF1Q8TES7 1133 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 SKA2Q8WVK7 121 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 PRR11Q96HE9 360 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 TGM7Q96PF1 710 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 CMKLR1Q99788 373 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 MCMBPQ9BTE3 642 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 TSPYL1Q9H0U9 437 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 SRMSQ9H3Y6 488 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 POLR1BQ9H9Y6 1135 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 TAS2R13Q9NYV9 303 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 TSR3Q9UJK0 312 aaKnown RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 CORO1CQ9ULV4 474 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 RUVBL2Q9Y230 463 aaKnown RBP13.16□□□□□ -0.3
COL1A1-208ENST00000494334 VWA7Q9Y334 891 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 AK5Q9Y6K8 562 aa13.16□□□□□ -0.3
COL1A1-208ENST00000494334 BTN3A3O00478 584 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 PLD2O14939 933 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 HGSO14964 777 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 KIF1CO43896 1103 aaKnown RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 SPAG6O75602 509 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 MATN4O95460 622 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 C1orf105O95561 183 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 CAPNS1P04632 268 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 RPN2P04844 631 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 HGFP14210 728 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 POLR2CP19387 275 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FDXRP22570 491 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 SKIV2L2P42285 1042 aaKnown RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 PGGT1BP53609 377 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 GABREP78334 506 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 KBTBD12Q3ZCT8 623 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 TEX35Q5T0J7 233 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FAM45BPQ6NSW5 357 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 IRGCQ6NXR0 463 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FAM92BQ6ZTR7 304 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 NEK10Q6ZWH5 1172 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 AMIGO1Q86WK6 493 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 DCUN1D3Q8IWE4 304 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 CPNE9Q8IYJ1 553 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FBXO39Q8N4B4 442 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FAM45AQ8TCE6 357 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 ZDHHC12Q96GR4 267 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 FOPNLQ96NB1 174 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms