RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NATD1Q8N6N6 113 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 SRMSQ9H3Y6 488 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 DPEP2Q9H4A9 486 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 GPN1Q9HCN4 374 aaPredicted RBP18.83■□□□□ 0.61
COL27A1-207ENST00000494090 MCUBQ9NWR8 336 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 B3GALT2O43825 422 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 NDUFS1P28331 727 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 SLC18A2Q05940 514 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 PITRM1Q5JRX3 1037 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 ZC3H3Q8IXZ2 948 aaKnown RBP18.83■□□□□ 0.6
COL27A1-207ENST00000494090 CADM2Q8N3J6 435 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 HBEGFQ99075 208 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 MIPEPQ99797 713 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 LRRC3Q9BY71 257 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 POLR3BQ9NW08 1133 aaPredicted RBP18.83■□□□□ 0.6
COL27A1-207ENST00000494090 ARL5AQ9Y689 179 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 PRORSD1PA6NEY8 169 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 PRODHO43272 600 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 CCNB2O95067 398 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 CCR10P46092 362 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 IL18R1Q13478 541 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 OR5K1Q8NHB7 308 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 KCNS3Q9BQ31 491 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 TRIM39Q9HCM9 518 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 TEX264Q9Y6I9 313 aa18.83■□□□□ 0.6
COL27A1-207ENST00000494090 PARP4Q9UKK3 1724 aaKnown RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 UNCXA6NJT0 531 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TBX10O75333 385 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 DDX6P26196 483 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 CHRNA4P43681 627 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 CCNHP51946 323 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 EEFSECP57772 596 aaKnown RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 ZNF311Q5JNZ3 666 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TMEM214Q6NUQ4 689 aaKnown RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 DNAJB7Q7Z6W7 309 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 GPR65Q8IYL9 337 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 FCRL4Q96PJ5 515 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TRIM2Q9C040 744 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 CD320Q9NPF0 282 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 THUMPD1Q9NXG2 353 aaKnown RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 SLC17A6Q9P2U8 582 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 MAN2B2Q9Y2E5 1009 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 Q9Y3F1 56 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 KHKP50053 298 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 SUZ12Q15022 739 aaKnown RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TCEAL1Q15170 157 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 PLET1Q6UQ28 207 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 ANKRD46Q86W74 232 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 OR52J3Q8NH60 311 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 RNF31Q96EP0 1072 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TRNT1Q96Q11 434 aaKnown RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 AIREO43918 545 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 DNAJB1P25685 340 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TIGD5Q53EQ6 642 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 CARD16Q5EG05 197 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 C7orf61Q8IZ16 206 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 HTRA1Q92743 480 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 EURLQ9NYK6 297 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 ZNF282Q9UDV7 671 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 CD84Q9UIB8 345 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 MKL2Q9ULH7 1088 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 LTN1O94822 1766 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 RAB2AP61019 212 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 SLC39A4Q6P5W5 647 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 GALNT7Q86SF2 657 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 AVL9Q8NBF6 648 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TRPV1Q8NER1 839 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 ZBED6CLQ96FA7 236 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-207ENST00000494090 TWNKQ96RR1 684 aa18.82■□□□□ 0.6
COL27A1-207ENST00000494090 C9P02748 559 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 SLC9A4Q6AI14 798 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 RAB2BQ8WUD1 216 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 C1orf21Q9H246 121 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 TPK1Q9H3S4 243 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 DHRS7Q9Y394 339 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 E7ENX8 843 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 HLA-DQB2P05538 268 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 IFI44LQ53G44 452 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-207ENST00000494090 C2orf73Q8N5S3 287 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-207ENST00000494090 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 SNX33Q8WV41 574 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 EBPLQ9BY08 206 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 PIGVQ9NUD9 493 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 RSL1D1O76021 490 aaKnown RBP18.81■□□□□ 0.6
COL27A1-207ENST00000494090 KCNA5P22460 613 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 IL12BP29460 328 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 HOXC12P31275 282 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 CDH12P55289 794 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 NRSN1Q8IZ57 195 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 EFHD2Q96C19 240 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-207ENST00000494090 TMEM175Q9BSA9 504 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 SLC45A1Q9Y2W3 748 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 PEX16Q9Y5Y5 336 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 CLDN25C9JDP6 229 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 hCG_2039718K7EN88 272 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 BTN3A3O00478 584 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms