RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 AMIGO1Q86WK6 493 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 TMEM126BQ8IUX1 230 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 CCDC89Q8N998 374 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 OR6P1Q8NGX9 317 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 OR4L1Q8NH43 312 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 OR1L3Q8NH93 324 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 LKAAEAR1Q8TD35 194 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 UBE2Q2Q8WVN8 375 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 TRAPPC9Q96Q05 1148 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 PITPNM3Q9BZ71 974 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 TWSG1Q9GZX9 223 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 ACTL8Q9H568 366 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 CHRAC1Q9NRG0 131 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 PAK5Q9P286 719 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 MARCH4Q9P2E8 410 aaPredicted RBP9.46□□□□□ -0.9
UFD1-210ENST00000494054 TUBD1Q9UJT1 453 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 KCND3Q9UK17 655 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 ICKQ9UPZ9 632 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 DRG1Q9Y295 367 aaKnown RBP9.46□□□□□ -0.9
UFD1-210ENST00000494054 TCAF1Q9Y4C2 921 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 PCDHB3Q9Y5E6 796 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 MYO18BQ8IUG5 2567 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 PIKFYVEQ9Y2I7 2098 aa9.46□□□□□ -0.9
UFD1-210ENST00000494054 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 IQCF5A8MTL0 148 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 C21orf140B9A014 251 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 MATN2O00339 956 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 HCRTR1O43613 425 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 GAS8O95995 478 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 FGGP02679 453 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 FTH1P02794 183 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CCDC175P0C221 793 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 OR56A5P0C7T3 313 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 SPTBP11277 2137 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CCR7P32248 378 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 KCNJ1P48048 391 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CSE1LP55060 971 aaKnown RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 SESN2P58004 480 aaPredicted RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 CRADDP78560 199 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CCZ1BP86790 482 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CCZ1P86791 482 aaPredicted RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 KCNC4Q03721 635 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 LYPLAL1Q5VWZ2 237 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 DRICH1Q6PGQ1 229 aaPredicted RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 AFTPHQ6ULP2 937 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 ZNF517Q6ZMY9 492 aaPredicted RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 UNC5AQ6ZN44 842 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 ZNF662Q6ZS27 426 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CDHR3Q6ZTQ4 885 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 TRIM73Q86UV7 250 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 VRK3Q8IV63 474 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 LRRC8AQ8IWT6 810 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 LMNTD1Q8N9Z9 388 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 OR8K5Q8NH50 307 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 FLVCR1-AS1Q8TAF5 88 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 C9orf43Q8TAL5 461 aaPredicted RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 MR1Q95460 341 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 SGSM3Q96HU1 749 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CHST8Q9H2A9 424 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 FAM60AQ9NP50 221 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 LATS2Q9NRM7 1088 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 SPHK1Q9NYA1 384 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 ACTR10Q9NZ32 417 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 PLAGL1Q9UM63 463 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 CDYLQ9Y232 598 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 POLHQ9Y253 713 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 FARSAQ9Y285 508 aaKnown RBP9.45□□□□□ -0.9
UFD1-210ENST00000494054 ASF1AQ9Y294 204 aa9.45□□□□□ -0.9
UFD1-210ENST00000494054 TCRBV7S3A2A0A539 114 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 C2orf74A8MZ97 194 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 TMEM150CB9EJG8 249 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 MEN1O00255 615 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 QSOX1O00391 747 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 GPC4O75487 556 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 RECKO95980 971 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 CAPN1P07384 714 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 CTSBP07858 339 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 UGT2B7P16662 529 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 NR1D1P20393 614 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 PTPN4P29074 926 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 CXCR5P32302 372 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 RORAP35398 523 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 PRAMEP78395 509 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 TLE1Q04724 770 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 IL10RAQ13651 578 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 ZIC1Q15915 447 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 SYTL3Q4VX76 610 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 FASTKD1Q53R41 847 aaKnown RBP9.44□□□□□ -0.9
UFD1-210ENST00000494054 PCID2Q5JVF3 399 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 COLEC12Q5KU26 742 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 FAM69BQ5VUD6 431 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 SPESP1Q6UW49 350 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 NLRP9Q7RTR0 991 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 TBC1D21Q8IYX1 336 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 DSELQ8IZU8 1212 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 KRT222Q8N1A0 295 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 PRELID2Q8N945 189 aa9.44□□□□□ -0.9
UFD1-210ENST00000494054 PPHLN1Q8NEY8 458 aaKnown RBP9.44□□□□□ -0.9
UFD1-210ENST00000494054 OR5K2Q8NHB8 316 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms