RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZP3P21754 424 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PSMA3P25788 255 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CDH13P55290 713 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PSPHP78330 225 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GPR17Q13304 367 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CAPRIN1Q14444 709 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 UAP1L1Q3KQV9 507 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZMAT1Q5H9K5 638 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LDLRAD1Q5T700 205 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EPGNQ6UW88 154 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 IGDCC3Q8IVU1 814 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EMC1Q8N766 993 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CNTD1Q8N815 330 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PABPC5Q96DU9 382 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PGAP3Q96FM1 320 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TRMT2BQ96GJ1 504 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TRIM62Q9BVG3 475 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TTLL2Q9BWV7 592 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LDAHQ9H6V9 325 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 IL1RAPQ9NPH3 570 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 DYRK4Q9NR20 520 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 NAALAD2Q9Y3Q0 740 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TNPO3Q9Y5L0 923 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ORC6Q9Y5N6 252 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CLCA3PQ9Y6N3 262 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EFCAB10A6NFE3 127 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 KPNA7A9QM74 516 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 WNT10BO00744 389 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 HS6ST1O60243 411 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EIF1BO60739 113 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RFPL1O75677 317 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ANGPTL1O95841 491 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 MBP02144 154 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CAPNS1P04632 268 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ACSM4P0C7M7 580 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CKMT1AP12532 417 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PRKAR2AP13861 404 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF30P17039 623 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TAL1P17542 331 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SYN1P17600 705 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 FSHRP23945 695 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CHMP24386 653 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PSMA2P25787 234 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 YWHABP31946 246 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ATP6V1E1P36543 226 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SREBF1P36956 1147 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EIF1P41567 113 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GNPDA1P46926 289 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TBX4P57082 545 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 C21orf58P58505 322 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SNAP25P60880 206 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RPS7P62081 194 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CLEC16AQ2KHT3 1053 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 USP50Q70EL3 339 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RTL10Q7L3V2 364 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 VN1R5Q7Z5H4 357 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GPR142Q7Z601 462 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 MILR1Q7Z6M3 343 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ADGRD2Q7Z7M1 963 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SYVN1Q86TM6 617 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 FAM35AQ86V20 835 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 VWA5B2Q8N398 1253 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF540Q8NDQ6 660 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 KBTBD8Q8NFY9 601 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SLC22A17Q8WUG5 538 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 COA7Q96BR5 231 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CCDC126Q96EE4 140 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 KLHL15Q96M94 604 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 HS6ST2Q96MM7 605 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 BTBD1Q9H0C5 482 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PIF1Q9H611 641 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ESRP2Q9H6T0 727 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TOPORSQ9NS56 1045 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SDHAF2Q9NX18 166 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GTSE1Q9NYZ3 720 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 VTI1BQ9UEU0 232 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CLEC4AQ9UMR7 237 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ADAMTS5Q9UNA0 930 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZFR2Q9UPR6 939 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 MAB21L2Q9Y586 359 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CSNK1G3Q9Y6M4 447 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 A0A1W2PPL8 197 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 hCG_1807616A0A1W2PRN6 198 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 METTL15A6NJ78 407 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SLC9B1P1A6NJY1 282 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FZD9O00144 591 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 IPO13O94829 963 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM63AO94886 807 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CCNB2O95067 398 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 GDF11O95390 407 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 KLK3P07288 261 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ACADMP11310 421 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 VAMP1P23763 118 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FMO3P31513 532 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CASP2P42575 452 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PRMT2P55345 433 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 EXOSC2Q13868 293 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms