RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 KLK13Q9UKR3 277 aa16.41■□□□□ 0.22
RER1-208ENST00000493207 WASF3Q9UPY6 502 aa16.41■□□□□ 0.22
RER1-208ENST00000493207 TDRKHQ9Y2W6 561 aaKnown RBP16.41■□□□□ 0.22
RER1-208ENST00000493207 VWA7Q9Y334 891 aa16.41■□□□□ 0.22
RER1-208ENST00000493207 NFS1Q9Y697 457 aa16.41■□□□□ 0.22
RER1-208ENST00000493207 CSO75390 466 aaKnown RBP16.4■□□□□ 0.22
RER1-208ENST00000493207 GP5P40197 560 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 SKIV2L2P42285 1042 aaKnown RBP16.4■□□□□ 0.22
RER1-208ENST00000493207 CFHR1Q03591 330 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 TARDBPQ13148 414 aaKnown RBP eCLIP16.4■□□□□ 0.229e-7■■■■□ 21
RER1-208ENST00000493207 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
RER1-208ENST00000493207 UNC5DQ6UXZ4 953 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 B3GNT8Q7Z7M8 397 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 DCBLD1Q8N8Z6 715 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 OR52E1Q8NGJ3 308 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 UHMK1Q8TAS1 419 aaKnown RBP16.4■□□□□ 0.22
RER1-208ENST00000493207 RSC1A1Q92681 617 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 MRRFQ96E11 262 aaKnown RBP16.4■□□□□ 0.22
RER1-208ENST00000493207 FOPNLQ96NB1 174 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 CYTH2Q99418 400 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 NRTNQ99748 197 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 EPB41L1Q9H4G0 881 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 ACSS3Q9H6R3 686 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 TMEM9Q9P0T7 183 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 POLG2Q9UHN1 485 aa16.4■□□□□ 0.22
RER1-208ENST00000493207 MTO1Q9Y2Z2 717 aaKnown RBP16.4■□□□□ 0.22
RER1-208ENST00000493207 RPN2P04844 631 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 CBSLP0DN79 551 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 HOXB3P14651 431 aaPredicted RBP16.39■□□□□ 0.21
RER1-208ENST00000493207 CD9P21926 228 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 MPSTP25325 297 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 CBSP35520 551 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 BDKRB1P46663 353 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 CAPZBP47756 277 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 VSNL1P62760 191 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 SQSTM1Q13501 440 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 ERCC6LQ2NKX8 1250 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 GRTP1Q5TC63 336 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 WDR74Q6RFH5 385 aaPredicted RBP16.39■□□□□ 0.21
RER1-208ENST00000493207 PAQR3Q6TCH7 311 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 CCNI2Q6ZMN8 369 aaPredicted RBP16.39■□□□□ 0.21
RER1-208ENST00000493207 TRMT10CQ7L0Y3 403 aaKnown RBP16.39■□□□□ 0.21
RER1-208ENST00000493207 OR4E2Q8NGC2 313 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 EEF1AKMT1Q8WVE0 214 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 LCN9Q8WX39 176 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 TXLNGYQ9BZA5 131 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 SEMA6CQ9H3T2 930 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 SRMSQ9H3Y6 488 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 XKR8Q9H6D3 395 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 CIDEBQ9UHD4 219 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 PLAGL1Q9UM63 463 aa16.39■□□□□ 0.21
RER1-208ENST00000493207 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 OR6C74A6NCV1 312 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 RIPK2O43353 540 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 MATN4O95460 622 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 ENO3P13929 434 aaPredicted RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 SPRP35270 261 aaPredicted RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 LIMK2P53671 638 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 INHBCP55103 352 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 ILF2Q12905 390 aaKnown RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 ZNF460Q14592 562 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 UAP1Q16222 522 aaPredicted RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 CLPPQ16740 277 aaPredicted RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 ISXQ2M1V0 245 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 PHF19Q5T6S3 580 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 ZNF574Q6ZN55 896 aaPredicted RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 NEK10Q6ZWH5 1172 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 PIWIL4Q7Z3Z4 852 aaKnown RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 DCUN1D3Q8IWE4 304 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 CACTIN-AS1Q8N1I8 211 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 OR4D9Q8NGE8 314 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 DPYSL5Q9BPU6 564 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 TFB2MQ9H5Q4 396 aaKnown RBP16.38■□□□□ 0.21
RER1-208ENST00000493207 CAB39LQ9H9S4 337 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 SLC39A10Q9ULF5 831 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 ENTPD2Q9Y5L3 495 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 SPTBN2O15020 2390 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 CACNA1AO00555 2505 aa16.38■□□□□ 0.21
RER1-208ENST00000493207 IGHV5-10-1A0A0J9YXX1 117 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 OR5K3A6NET4 321 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 AGRPO00253 132 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 EIF3FO00303 357 aaPredicted RBP16.37■□□□□ 0.21
RER1-208ENST00000493207 C1orf105O95561 183 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 TPBGLP0DKB5 382 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 MPC1LP0DKB6 136 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 RGS4P49798 205 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 SLC12A2P55011 1212 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 GFERP55789 205 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 TAS2R39P59534 338 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 POU4F1Q01851 419 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 ZFP36L1Q07352 338 aaKnown RBP16.37■□□□□ 0.21
RER1-208ENST00000493207 SNAP47Q5SQN1 464 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 IRGCQ6NXR0 463 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 TMEM71Q6P5X7 295 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 TTC23LQ6PF05 361 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 KLHL35Q6PF15 583 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 AMIGO1Q86WK6 493 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 OOSP2Q86WS3 158 aa16.37■□□□□ 0.21
RER1-208ENST00000493207 PLXDC1Q8IUK5 500 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms