RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 EIF3IQ13347 325 aaKnown RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 RBM20Q5T481 1227 aaKnown RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 UNC5DQ6UXZ4 953 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 CYS1Q717R9 158 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 SLC26A11Q86WA9 606 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 AMIGO1Q86WK6 493 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 CTAGE3PQ8IX95 158 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 FBXO39Q8N4B4 442 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 LRRN4CLQ8ND94 238 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 GATA6Q92908 595 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 LIN37Q96GY3 246 aaPredicted RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 POLR1BQ9H9Y6 1135 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 EPHA6Q9UF33 1036 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 TRMT6Q9UJA5 497 aaKnown RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 CORO1CQ9ULV4 474 aaPredicted RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 VWA7Q9Y334 891 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 PLXNB3Q9ULL4 1909 aa13.58□□□□□ -0.23
CCM2-217ENST00000492883 OR5K3A6NET4 321 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 C1QTNF9BB2RNN3 333 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 RASSF9O75901 435 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 C1QTNF9P0C862 333 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 JMJD7P0C870 316 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 THRAP10827 490 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 POLR2CP19387 275 aaPredicted RBP13.58□□□□□ -0.24
CCM2-217ENST00000492883 SAT1P21673 171 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 RBMS1P29558 406 aaKnown RBP13.58□□□□□ -0.24
CCM2-217ENST00000492883 ATP5DP30049 168 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 STX2P32856 288 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 CSTF2P33240 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCM2-217ENST00000492883 PHBP35232 272 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 LSSP48449 732 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 GFERP55789 205 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 CYP4F3Q08477 520 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 RTP5Q14D33 572 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 KYNUQ16719 465 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 HECTD2Q5U5R9 776 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 FAM92BQ6ZTR7 304 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 MAGEC3Q8TD91 643 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 FBF1Q8TES7 1133 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 RAB33BQ9H082 229 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 XKR8Q9H6D3 395 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 SMYD2Q9NRG4 433 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 NFU1Q9UMS0 254 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 RUVBL2Q9Y230 463 aaKnown RBP13.58□□□□□ -0.24
CCM2-217ENST00000492883 LOXL2Q9Y4K0 774 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 PSAT1Q9Y617 370 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 NFS1Q9Y697 457 aa13.58□□□□□ -0.24
CCM2-217ENST00000492883 GSAPA4D1B5 854 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 FAM159BA6NKW6 160 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CXorf49A8MYA2 514 aaPredicted RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 PLD2O14939 933 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 HGSO14964 777 aaPredicted RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 TNFSF15O95150 251 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 C9P02748 559 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CBSLP0DN79 551 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 ENO3P13929 434 aaPredicted RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 HGFP14210 728 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 MCM3P25205 808 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 ECHS1P30084 290 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 SHMT2P34897 504 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CBSP35520 551 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 RGS4P49798 205 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CDKN2DP55273 166 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 ILF2Q12905 390 aaKnown RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 GBX1Q14549 363 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 C16orf72Q14CZ0 275 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 KBTBD12Q3ZCT8 623 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CACHD1Q5VU97 1274 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 FAM45BPQ6NSW5 357 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 NEK10Q6ZWH5 1172 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 ZC3HC1Q86WB0 502 aaKnown RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 RELL1Q8IUW5 271 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 DCUN1D3Q8IWE4 304 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CPNE9Q8IYJ1 553 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 AGBL5Q8NDL9 886 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 GIMAP7Q8NHV1 300 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 FAM45AQ8TCE6 357 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CD200R1Q8TD46 325 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 RAD51AP1Q96B01 352 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 ELMO2Q96JJ3 720 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 NRTNQ99748 197 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CPNE1Q99829 537 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 CCDC86Q9H6F5 360 aaKnown RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 SLC39A10Q9ULF5 831 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 PLAGL1Q9UM63 463 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 ICKQ9UPZ9 632 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
CCM2-217ENST00000492883 MN1Q10571 1320 aaPredicted RBP13.57□□□□□ -0.24
CCM2-217ENST00000492883 DCHS1Q96JQ0 3298 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms