RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ELMO1Q92556 727 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 SGSM3Q96HU1 749 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 TRAPPC9Q96Q05 1148 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 RANBP9Q96S59 729 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 DHRS4Q9BTZ2 278 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 TLR10Q9BXR5 811 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 CHST8Q9H2A9 424 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ACTR5Q9H9F9 607 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ACSS2Q9NR19 701 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ACTR10Q9NZ32 417 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ANAPC5Q9UJX4 755 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ASF1AQ9Y294 204 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 PADI2Q9Y2J8 665 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 PCDHGA9Q9Y5G4 932 aaKnown RBP12.08□□□□□ -0.48
COL6A1-205ENST00000492851 UBR5O95071 2799 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-205ENST00000492851 MYO18BQ8IUG5 2567 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 TMEM150CB9EJG8 249 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 C9J4A7 227 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 BTN3A1O00481 513 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 KRT86O43790 486 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 KLHL41O60662 606 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 SUN1O94901 812 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 FTCDO95954 541 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 IGHEP01854 428 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 RPN2P04844 631 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 PDHA2P29803 388 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 RORAP35398 523 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 ARCN1P48444 511 aaKnown RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 PGDP52209 483 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 RRADP55042 308 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 GPS2Q13227 327 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 PRKG2Q13237 762 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 UBAP2LQ14157 1087 aaKnown RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 SYTL3Q4VX76 610 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 AFTPHQ6ULP2 937 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 SPESP1Q6UW49 350 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 C4orf22Q6V702 233 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 PPP1R21Q6ZMI0 780 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 MED25Q71SY5 747 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 PIANPQ8IYJ0 282 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 ADGRF3Q8IZF5 1079 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 TMEM102Q8N9M5 508 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 SLC38A9Q8NBW4 561 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 OR5K2Q8NHB8 316 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 NAT14Q8WUY8 206 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 SLC25A23Q9BV35 468 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 ING2Q9H160 280 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 AKIRIN1Q9H9L7 192 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 TCFL5Q9UL49 500 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
COL6A1-205ENST00000492851 TLN1Q9Y490 2541 aaKnown RBP12.07□□□□□ -0.48
COL6A1-205ENST00000492851 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 CCDC162PA2VCL2 907 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 LIASO43766 372 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 ST6GAL1P15907 406 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 VARSP26640 1264 aaKnown RBP12.06□□□□□ -0.48
COL6A1-205ENST00000492851 ACADLP28330 430 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 CDC25BP30305 580 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 GDF10P55107 478 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 KIR2DS3Q14952 304 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
COL6A1-205ENST00000492851 DNAJC21Q5F1R6 531 aaKnown RBP12.06□□□□□ -0.48
COL6A1-205ENST00000492851 COLEC12Q5KU26 742 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 PAPD7Q5XG87 772 aaKnown RBP12.06□□□□□ -0.48
COL6A1-205ENST00000492851 FBXO38Q6PIJ6 1188 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 UNC5AQ6ZN44 842 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 TMEM135Q86UB9 458 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 TMEM139Q8IV31 216 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 SYTL1Q8IYJ3 562 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 ENDOVQ8N8Q3 282 aaKnown RBP12.06□□□□□ -0.48
COL6A1-205ENST00000492851 CCDC89Q8N998 374 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 OR52K1Q8NGK4 314 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 OR4L1Q8NH43 312 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 OR1L3Q8NH93 324 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 ASZ1Q8WWH4 475 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 SLC22A18Q96BI1 424 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 RNF31Q96EP0 1072 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 PPM1MQ96MI6 270 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 HGH1Q9BTY7 390 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 ETNK1Q9HBU6 452 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 MLXIPLQ9NP71 852 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 PCMTD2Q9NV79 361 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 PAK5Q9P286 719 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 R3HDM2Q9Y2K5 976 aaKnown RBP12.06□□□□□ -0.48
COL6A1-205ENST00000492851 ZNF451Q9Y4E5 1061 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 MRFAP1Q9Y605 127 aa12.06□□□□□ -0.48
COL6A1-205ENST00000492851 SLC5A10A0PJK1 596 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 KPNA5O15131 536 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 ZNF749O43361 778 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 OR2B3O76000 313 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 TMEM63AO94886 807 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 IFNB1P01574 187 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 FOXN2P32314 431 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 CD97P48960 835 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 CCL11P51671 97 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 RPS18P62269 152 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms