RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ITIH1P19827 911 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ATP5DP30049 168 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MGAT5Q09328 741 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ABRQ12979 859 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GBX1Q14549 363 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TBC1D25Q3MII6 688 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ARMC6Q6NXE6 501 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 UNC5DQ6UXZ4 953 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CAPN12Q6ZSI9 719 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ARHGAP22Q7Z5H3 698 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CCDC25Q86WR0 208 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PALM2Q8IXS6 379 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZBTB2Q8N680 514 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 OR4E2Q8NGC2 313 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CFAP61Q8NHU2 1237 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZNF578Q96N58 590 aaPredicted RBP15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC46A1Q96NT5 459 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SRMSQ9H3Y6 488 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ASCL3Q9NQ33 180 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FAM114A2Q9NRY5 505 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 THSD1Q9NS62 852 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 HRASLS2Q9NWW9 162 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC17A6Q9P2U8 582 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GALPQ9UBC7 116 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TOX3O15405 576 aaPredicted RBP15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KDM1AO60341 852 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RASSF9O75901 435 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CLCN7P51798 805 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MAPK10P53779 464 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ERVPABLB-1P60509 514 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PPP1CAP62136 330 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PRKAA1Q13131 559 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TTLL9Q3SXZ7 439 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FAM92BQ6ZTR7 304 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PRSS42Q7Z5A4 293 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 AMIGO1Q86WK6 493 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PROSER1Q86XN7 944 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SIDT2Q8NBJ9 832 aaKnown RBP15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SKA2Q8WVK7 121 aaPredicted RBP15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NDNQ99608 321 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FAM129AQ9BZQ8 928 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MOCS1Q9NZB8 636 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZFATQ9P243 1243 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KLHL42Q9P2K6 505 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TSR3Q9UJK0 312 aaKnown RBP15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZMIZ1Q9ULJ6 1067 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ICKQ9UPZ9 632 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TDRKHQ9Y2W6 561 aaKnown RBP15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MED16Q9Y2X0 877 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 AKAP13Q12802 2813 aa15.82■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 EFCAB7A8K855 629 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CDRT15L2A8MXV6 281 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 VPS26AO75436 327 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 AHSGP02765 367 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CCL4P13236 92 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 POLR2CP19387 275 aaPredicted RBP15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GABRB3P28472 473 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SHMT2P34897 504 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ETV5P41161 510 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ST3GAL2Q16842 350 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ACSBG2Q5FVE4 666 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 DNTTIP2Q5QJE6 756 aaKnown RBP15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CACHD1Q5VU97 1274 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CLEC14AQ86T13 490 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FAM129CQ86XR2 697 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 DCUN1D3Q8IWE4 304 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GIMAP7Q8NHV1 300 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FOPNLQ96NB1 174 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CD180Q99467 661 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GPR21Q99679 349 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC30A3Q99726 388 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NRTNQ99748 197 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZNF768Q9H5H4 540 aaKnown RBP15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 XKR8Q9H6D3 395 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZDHHC18Q9NUE0 388 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 DMGDHQ9UI17 866 aaKnown RBP15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CORO1CQ9ULV4 474 aaPredicted RBP15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 DHRS7Q9Y394 339 aa15.81■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GSAPA4D1B5 854 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TLCD2A6NGC4 264 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 B4E171 279 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MATN2O00339 956 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 BTN3A1O00481 513 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TLX3O43711 291 aaPredicted RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KIF1CO43896 1103 aaKnown RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GSTA2P09210 222 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FGF3P11487 239 aaPredicted RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SSTR1P30872 391 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TSPAN7P41732 249 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MAGEA4P43358 317 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ABCG1P45844 678 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SEPHS1P49903 392 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KPNA2P52292 529 aaKnown RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KYNUQ16719 465 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KLHL38Q2WGJ6 581 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RBM20Q5T481 1227 aaKnown RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 UGT3A1Q6NUS8 523 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TTC23LQ6PF05 361 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC26A11Q86WA9 606 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SNIP1Q8TAD8 396 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms