RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SCML1Q9UN30 329 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 PLXNB3Q9ULL4 1909 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 PRR23AA6NEV1 266 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 PRORSD1PA6NEY8 169 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 K7ESF4 209 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 ZNF30P17039 623 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 ELP6Q0PNE2 266 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 APOFQ13790 326 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 FAM45BPQ6NSW5 357 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 FAM45AQ8TCE6 357 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 RLN3Q8WXF3 142 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 ITM2CQ9NQX7 267 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 ZFR2Q9UPR6 939 aaKnown RBP22.31■■□□□ 1.16
USF3-203ENST00000491165 CCDC162PA2VCL2 907 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 NRP2O60462 931 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 SRP72O76094 671 aaKnown RBP22.31■■□□□ 1.16
USF3-203ENST00000491165 C6P13671 934 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 SPINT3P49223 89 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 CDKN1CP49918 316 aaPredicted RBP22.31■■□□□ 1.16
USF3-203ENST00000491165 TMEM52BQ4KMG9 183 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 SAMD4BQ5PRF9 694 aaKnown RBP22.31■■□□□ 1.16
USF3-203ENST00000491165 HACD2Q6Y1H2 254 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 USP30Q70CQ3 517 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 PTAR1Q7Z6K3 402 aaPredicted RBP22.31■■□□□ 1.16
USF3-203ENST00000491165 FAM160A2Q8N612 972 aaPredicted RBP22.31■■□□□ 1.16
USF3-203ENST00000491165 SCAMP4Q969E2 229 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 MPP4Q96JB8 637 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 SEMA6AQ9H2E6 1030 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 IL26Q9NPH9 171 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 CD300AQ9UGN4 299 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 CROTQ9UKG9 612 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 PADI4Q9UM07 663 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 PKP3Q9Y446 797 aa22.31■■□□□ 1.16
USF3-203ENST00000491165 SLC7A4O43246 635 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 GOT2P00505 430 aaKnown RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 SLC26A3P40879 764 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 ATP4BP51164 291 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 TSSK4Q6SA08 328 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 LRTOMTQ8WZ04 291 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 PEX13Q92968 403 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 L3HYPDHQ96EM0 354 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 DUS3LQ96G46 650 aaKnown RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 ZNF597Q96LX8 424 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 ALG9Q9H6U8 611 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 TMEM181Q9P2C4 612 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 RIMKLBQ9ULI2 386 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 FZD4Q9ULV1 537 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 CYP8B1Q9UNU6 501 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 A0A1B0GVG6 124 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 TCRBV3S1A0A5B6 114 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 H0Y858 1186 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 UBFD1O14562 309 aaKnown RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 RPP40O75818 363 aaKnown RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 PCDH8O95206 1070 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 SLC7A1P30825 629 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 SEMA3AQ14563 771 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 NRF1Q16656 503 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 ZNF678Q5SXM1 525 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 CLEC6AQ6EIG7 209 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 FAM151BQ6UXP7 276 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 B3GNT6Q6ZMB0 384 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 LARP4Q71RC2 724 aaKnown RBP eCLIP22.3■■□□□ 1.16
USF3-203ENST00000491165 TECPR1Q7Z6L1 1165 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 LDB1Q86U70 411 aaPredicted RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 OR6P1Q8NGX9 317 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 RBM38Q9H0Z9 239 aaKnown RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 COQ10BQ9H8M1 238 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 MARCH4Q9P2E8 410 aaPredicted RBP22.3■■□□□ 1.16
USF3-203ENST00000491165 DMTF1Q9Y222 760 aa22.3■■□□□ 1.16
USF3-203ENST00000491165 CCDC160A6NGH7 325 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 SUPT7LO94864 414 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 WISP3O95389 354 aaPredicted RBP22.29■■□□□ 1.16
USF3-203ENST00000491165 CXCL12P48061 93 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 ACADVLP49748 655 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 SUOXP51687 545 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 CDKN2DP55273 166 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 STX1BP61266 288 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 PPP2CBP62714 309 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 PPP2CAP67775 309 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 DMWDQ09019 674 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 BIRC2Q13490 618 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 FGL2Q14314 439 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 ADRM1Q16186 407 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 CHERPQ8IWX8 916 aaKnown RBP22.29■■□□□ 1.16
USF3-203ENST00000491165 TMEM105Q8N8V8 129 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 COQ10AQ96MF6 247 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 EFHD1Q9BUP0 239 aa22.29■■□□□ 1.16
USF3-203ENST00000491165 MYOCOSA0A1B0GUC4 107 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 IGLON5A6NGN9 336 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 H7C0S8 307 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 MC4RP32245 332 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 NR1H2P55055 460 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 PRAMEP78395 509 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 ACOX1Q15067 660 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 C8orf82Q6P1X6 216 aaPredicted RBP22.28■■□□□ 1.16
USF3-203ENST00000491165 SNX31Q8N9S9 440 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 SLCO4A1Q96BD0 722 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 C19orf60Q96EN9 201 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 OSBPL11Q9BXB4 747 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 SNX13Q9Y5W8 968 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms