RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SLC17A7Q9P2U7 560 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ATXN10Q9UBB4 475 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MORF4L1Q9UBU8 362 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FBXO40Q9UH90 709 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CIDEBQ9UHD4 219 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF112Q9UJU3 913 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PTBP2Q9UKA9 531 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CPSF3Q9UKF6 684 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PNMA8BQ9ULN7 279 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TMCO1Q9UM00 188 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 BARX2Q9UMQ3 279 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PRPF19Q9UMS4 504 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ARHGAP26Q9UNA1 814 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMD13Q9UNM6 376 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PLA2G4CQ9UP65 541 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LZTS1Q9Y250 596 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MED16Q9Y2X0 877 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HS3ST3B1Q9Y662 390 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CDY1Q9Y6F8 540 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CLUHO75153 1309 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF541Q9H0D2 1346 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 COL4A1P02462 1669 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 COL24A1Q17RW2 1714 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 QSER1Q2KHR3 1735 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ABCA3Q99758 1704 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RGPD3A6NKT7 1758 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RGPD4Q7Z3J3 1758 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ANK1P16157 1881 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DOCK5Q9H7D0 1870 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZFC3H1O60293 1989 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 IGKV6-21A0A0C4DH24 114 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 LOC100653049A0A140TA62 436 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 TCRBV7S3A2A0A539 114 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 KANSL1LA0AUZ9 987 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 DYTNA2CJ06 578 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 LRRIQ4A6NIV6 560 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM159BA6NKW6 160 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 C2CD4BA6NLJ0 364 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ERI2A8K979 691 aaKnown RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 KRTAP29-1A8MX34 341 aaPredicted RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 TTC34A8MYJ7 566 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 KPNA7A9QM74 516 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM114B3SHH9 223 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 H0Y3Z8 333 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GOLGA8SH3BPF8 625 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GOLGA8MH3BSY2 632 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GOLGA8RI6L899 631 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 TRIM38O00635 465 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF195O14628 629 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 APOL1O14791 398 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 MDM4O15151 490 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 KCNN4O15554 427 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 BUD23O43709 281 aaKnown RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 CREB3O43889 395 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 HBP1O60381 514 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 MGEA5O60502 916 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GLRA3O75311 464 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 LRCH4O75427 683 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GPC4O75487 556 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 CABYRO75952 493 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 KRT34O76011 436 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 DDHD2O94830 711 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ABLIM3O94929 683 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 INMTO95050 263 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 LATS1O95835 1130 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 CLPTM1O96005 669 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GSRP00390 522 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 F9P00740 461 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 C1QAP02745 245 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 SERPINE1P05121 402 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 TFAP2AP05549 437 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 APOA4P06727 396 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ENO1P06733 434 aaKnown RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 APRTP07741 180 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 HOXC6P09630 235 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 SUPT20HL2P0C7V6 817 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ZCCHC18P0CG32 403 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 CCDC166P0CW27 439 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 HSPA8P11142 646 aaKnown RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 RALBP11234 206 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 COX4I1P13073 169 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 PRF1P14222 555 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 NCF2P19878 526 aaPredicted RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 BGNP21810 368 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ME2P23368 584 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 HOXD9P28356 352 aaPredicted RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 RBL1P28749 1068 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 TTKP33981 857 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 PEX19P40855 299 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 RGS2P41220 211 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 MAGEA3P43357 314 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 PTPN9P43378 593 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 ACADSBP45954 432 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMD8P48556 350 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 HSPA13P48723 471 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 RPL34P49207 117 aaKnown RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 GLUD2P49448 558 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 RPL14P50914 215 aaKnown RBP2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 RPS6KA3P51812 740 aa2.04□□□□□ -2.08
SNRNP40-207ENST00000491106 CACNB3P54284 484 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms