RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 ZNF37AP17032 561 aaPredicted RBP15.42■□□□□ 0.06
TRA2A-208ENST00000490942 MSH2P43246 934 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 TAS2R39P59534 338 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 SP140Q13342 867 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 BRD3Q15059 726 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 PPM1JQ5JR12 505 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 CDCP2Q5VXM1 449 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
TRA2A-208ENST00000490942 PAQR3Q6TCH7 311 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 NAPRTQ6XQN6 538 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 TMPRSS12Q86WS5 348 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 ISL2Q96A47 359 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 RAD51AP1Q96B01 352 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 FERD3LQ96RJ6 166 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 SLC30A3Q99726 388 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 OLFM1Q99784 485 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 ABCG4Q9H172 646 aa15.42■□□□□ 0.06
TRA2A-208ENST00000490942 MTO1Q9Y2Z2 717 aaKnown RBP15.42■□□□□ 0.06
TRA2A-208ENST00000490942 CCDC189A1A4V9 331 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 TMX2-CTNND1H3BSU7 103 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 GFYI3L273 518 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 KRT37O76014 449 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 TSPAN12O95859 305 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 CATP04040 527 aaKnown RBP15.41■□□□□ 0.06
TRA2A-208ENST00000490942 C8GP07360 202 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 NUDT17P0C025 328 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 CRABP2P29373 138 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 ABCG1P45844 678 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 RAB10P61026 200 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 USP10Q14694 798 aaKnown RBP15.41■□□□□ 0.06
TRA2A-208ENST00000490942 EFTUD2Q15029 972 aaKnown RBP eCLIP15.41■□□□□ 0.061e-10■■■■□ 23.4
TRA2A-208ENST00000490942 UBAP2Q5T6F2 1119 aaKnown RBP15.41■□□□□ 0.06
TRA2A-208ENST00000490942 ADGRD1Q6QNK2 874 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 CYHR1Q6ZMK1 362 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 DGLUCYQ7Z3D6 616 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 CPNE9Q8IYJ1 553 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 MYO1HQ8N1T3 1032 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 GALNT15Q8N3T1 639 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 UBLCP1Q8WVY7 318 aaPredicted RBP15.41■□□□□ 0.06
TRA2A-208ENST00000490942 ASB11Q8WXH4 323 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 FAM136AQ96C01 138 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 MTBPQ96DY7 904 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 ATXN7L3BQ96GX2 97 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 RAB11FIP5Q9BXF6 653 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 TWSG1Q9GZX9 223 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 GPAMQ9HCL2 828 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 EPHA6Q9UF33 1036 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 SLC39A10Q9ULF5 831 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 CFAP20Q9Y6A4 193 aaKnown RBP15.41■□□□□ 0.06
TRA2A-208ENST00000490942 SPTBN4Q9H254 2564 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 ASXL3Q9C0F0 2248 aa15.41■□□□□ 0.06
TRA2A-208ENST00000490942 A0A1W2PQM1 296 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 CCDC151A5D8V7 595 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 ZBTB14O43829 449 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 ERLIN1O75477 346 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 UBXN7O94888 489 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 C1orf105O95561 183 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 RPLP0P05388 317 aaKnown RBP15.4■□□□□ 0.06
TRA2A-208ENST00000490942 CD1CP29017 333 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 ALDH4A1P30038 563 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 SHMT2P34897 504 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 HSD17B3P37058 310 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 HSD17B2P37059 387 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 CAPZBP47756 277 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 CSRP3P50461 194 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 INSM1Q01101 510 aaPredicted RBP15.4■□□□□ 0.06
TRA2A-208ENST00000490942 ABRQ12979 859 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 SPIDRQ14159 915 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 RAB44Q7Z6P3 723 aaPredicted RBP15.4■□□□□ 0.06
TRA2A-208ENST00000490942 PIM3Q86V86 326 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 TDRPQ86YL5 185 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 CARFQ8N187 725 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 RAB42Q8N4Z0 105 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 OR52E1Q8NGJ3 308 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 DCAKDQ8WVC6 231 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 SKA2Q8WVK7 121 aaPredicted RBP15.4■□□□□ 0.06
TRA2A-208ENST00000490942 GFM1Q96RP9 751 aaKnown RBP15.4■□□□□ 0.06
TRA2A-208ENST00000490942 OR6C2Q9NZP2 312 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 PDP2Q9P2J9 529 aa15.4■□□□□ 0.06
TRA2A-208ENST00000490942 NOVA2Q9UNW9 492 aaKnown RBP15.4■□□□□ 0.06
TRA2A-208ENST00000490942 HMX2A2RU54 273 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 D6RAR5 112 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 MYO1CO00159 1063 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 TOX3O15405 576 aaPredicted RBP15.39■□□□□ 0.05
TRA2A-208ENST00000490942 CTIFO43310 598 aaKnown RBP15.39■□□□□ 0.05
TRA2A-208ENST00000490942 FAM155BO75949 473 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 ENO2P09104 434 aaPredicted RBP15.39■□□□□ 0.05
TRA2A-208ENST00000490942 SERPINB8P50452 374 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 RAB28P51157 221 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 OR1D5P58170 312 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 ATP6V0D1P61421 351 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 CCL7P80098 99 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 TRA2AQ13595 282 aaKnown RBP eCLIP15.39■□□□□ 0.052e-8■■■■■ 41.5
TRA2A-208ENST00000490942 ARHGAP19Q14CB8 494 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 PLCL1Q15111 1095 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
TRA2A-208ENST00000490942 DUS1LQ6P1R4 473 aaKnown RBP15.39■□□□□ 0.05
TRA2A-208ENST00000490942 TMEM71Q6P5X7 295 aa15.39■□□□□ 0.05
TRA2A-208ENST00000490942 RBM44Q6ZP01 1051 aaKnown RBP15.39■□□□□ 0.05
TRA2A-208ENST00000490942 TMPRSS7Q7RTY8 843 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms