RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 NAPGQ99747 312 aaPredicted RBP13.13□□□□□ -0.31
LMO4-203ENST00000489303 MAP3K3Q99759 626 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 HGH1Q9BTY7 390 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 EFHD1Q9BUP0 239 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 TRIM4Q9C037 500 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 APMAPQ9HDC9 416 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 RARRES3Q9UL19 164 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 FLNBO75369 2602 aaKnown RBP13.13□□□□□ -0.31
LMO4-203ENST00000489303 BOD1L1Q8NFC6 3051 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 IGHV5-51A0A0C4DH38 117 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SLC5A10A0PJK1 596 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SLC28A2O43868 658 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 AVILO75366 819 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 RPN2P04844 631 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 FAM87AP0C7U9 286 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 CDH3P22223 829 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SHMT2P34897 504 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 PAFAH1B1P43034 410 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 CSE1LP55060 971 aaKnown RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 PPP1CAP62136 330 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SH3BP2P78314 561 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 HSD11B2P80365 405 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 HSPA14Q0VDF9 509 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 NFATC3Q12968 1075 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 PRKG2Q13237 762 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 TUBB3Q13509 450 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 DNAJC21Q5F1R6 531 aaKnown RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 KIAA0930Q6ICG6 404 aaPredicted RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 CES3Q6UWW8 571 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 PCGF5Q86SE9 256 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 PPIL6Q8IXY8 311 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 ESX1Q8N693 406 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 RNF31Q96EP0 1072 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 ELMO2Q96JJ3 720 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 TCF12Q99081 682 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 ULBP3Q9BZM4 244 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 FANCEQ9HB96 536 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SOHLH2Q9NX45 425 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 MARCH4Q9P2E8 410 aaPredicted RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 ASIC3Q9UHC3 531 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 PILRAQ9UKJ1 303 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 TMEM184BQ9Y519 407 aaPredicted RBP13.12□□□□□ -0.31
LMO4-203ENST00000489303 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 SAR1BQ9Y6B6 198 aa13.12□□□□□ -0.31
LMO4-203ENST00000489303 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 C2orf74A8MZ97 194 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 H3BMM5 538 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 GOLGA8MH3BSY2 632 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 TMEM63AO94886 807 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 MT-ND3P03897 115 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 FGF5P12034 268 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 RPS3P23396 243 aaKnown RBP eCLIP13.11□□□□□ -0.31
LMO4-203ENST00000489303 CCR7P32248 378 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 KPNA2P52292 529 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 EIF3BP55884 814 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 THOC5Q13769 683 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 MAP7Q14244 749 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
LMO4-203ENST00000489303 PAPD7Q5XG87 772 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 TTC23LQ6PF05 361 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 NAPRTQ6XQN6 538 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 CAND1Q86VP6 1230 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 SLC22A15Q8IZD6 547 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 OR5AR1Q8NGP9 310 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 OR5K2Q8NHB8 316 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 STAMBPL1Q96FJ0 436 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 DDX47Q9H0S4 455 aaKnown RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 GPN2Q9H9Y4 310 aaPredicted RBP13.11□□□□□ -0.31
LMO4-203ENST00000489303 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 NEU2Q9Y3R4 380 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 MRFAP1Q9Y605 127 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 MAD1L1Q9Y6D9 718 aa13.11□□□□□ -0.31
LMO4-203ENST00000489303 IQCF5A8MTL0 148 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
LMO4-203ENST00000489303 BTN3A1O00481 513 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 SPAG6O75602 509 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 CCNYL3P0C7X3 344 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 OGNP20774 298 aaKnown RBP13.1□□□□□ -0.31
LMO4-203ENST00000489303 AOAHP28039 575 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 ACADLP28330 430 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 PRDX3P30048 256 aaKnown RBP13.1□□□□□ -0.31
LMO4-203ENST00000489303 TUBB4BP68371 445 aa13.1□□□□□ -0.31
LMO4-203ENST00000489303 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms