RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CWF19L1Q69YN2 538 aaKnown RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 METTL2BQ6P1Q9 378 aaKnown RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 MBOAT1Q6ZNC8 495 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 Q6ZSR6 202 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 LRRC70Q7Z2Q7 622 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 LSMEM2Q8N112 164 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 FRMD1Q8N878 549 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 CADM4Q8NFZ8 388 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 OR13H1Q8NG92 308 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 FAM174AQ8TBP5 190 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 MAGEC3Q8TD91 643 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 EDAQ92838 391 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 ATP6V1E2Q96A05 226 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 RHBDF1Q96CC6 855 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 FBXL8Q96CD0 374 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 PDXPQ96GD0 296 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 BMFQ96LC9 184 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 CCDC138Q96M89 665 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 RILPQ96NA2 401 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 NSUN5Q96P11 429 aaKnown RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 UHRF1Q96T88 793 aaPredicted RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 HGH1Q9BTY7 390 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 CD244Q9BZW8 370 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 OR52A5Q9H2C5 316 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 STN1Q9H668 368 aaKnown RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 MID1IP1Q9NPA3 183 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 SEMA4BQ9NPR2 832 aaPredicted RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 MRPL40Q9NQ50 206 aaKnown RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 GULP1Q9UBP9 304 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 HAO1Q9UJM8 370 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 PTBP2Q9UKA9 531 aaKnown RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 PSMD13Q9UNM6 376 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 KCNK6Q9Y257 313 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 INVSQ9Y283 1065 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 ASF1AQ9Y294 204 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 FIS1Q9Y3D6 152 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 PCYT1BQ9Y5K3 369 aaPredicted RBP9.78□□□□□ -0.84
USP11-211ENST00000489111 PRUNE2Q8WUY3 3088 aa9.78□□□□□ -0.84
USP11-211ENST00000489111 TRPC5OSA6NMA1 111 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 C10orf142B7Z368 130 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 K7EPI3 171 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 K7ESF4 209 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 E2F3O00716 465 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 TAPBPO15533 448 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 KIAA0754O94854 1291 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 C1orf105O95561 183 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 CHEK2O96017 543 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 OTCP00480 354 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 PDGFBP01127 241 aaPredicted RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 THEGLP0DJG4 465 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 ALOX15P16050 662 aaPredicted RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 EPB42P16452 691 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 AOC1P19801 751 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 IDSP22304 550 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 CD27P26842 260 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 HALP42357 657 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 CLCNKAP51800 687 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 PKNOX1P55347 436 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 SRP54P61011 504 aaKnown RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 GTF2H2Q13888 395 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 PDCD2Q16342 344 aaPredicted RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 METRNLQ641Q3 311 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 GTF2H2CQ6P1K8 395 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 GPRIN3Q6ZVF9 776 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 ACAD11Q709F0 780 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 EFL1Q7Z2Z2 1120 aaKnown RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 RD3Q7Z3Z2 195 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 GOLGA7Q7Z5G4 137 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 HID1Q8IV36 788 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 RASGRP3Q8IV61 690 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 DCUN1D3Q8IWE4 304 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 TEX9Q8N6V9 391 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 SNX31Q8N9S9 440 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 FBXO15Q8NCQ5 510 aaPredicted RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 ESAMQ96AP7 390 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 RMDN2Q96LZ7 410 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 HSPA12BQ96MM6 686 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 SLC6A18Q96N87 628 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 ZNF382Q96SR6 550 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 TMEM79Q9BSE2 394 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 EBF2Q9HAK2 575 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 DNAJC28Q9NX36 388 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 ZDHHC2Q9UIJ5 367 aa9.77□□□□□ -0.85
USP11-211ENST00000489111 APOBEC2Q9Y235 224 aaKnown RBP9.77□□□□□ -0.85
USP11-211ENST00000489111 METTL12A8MUP2 240 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 TMEM233B4DJY2 109 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 MATN2O00339 956 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 UBFD1O14562 309 aaKnown RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 HGSO14964 777 aaPredicted RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 AZIN1O14977 448 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 SCAMP1O15126 338 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 LAMTOR5O43504 91 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 KATNA1O75449 491 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 SKAP2O75563 359 aaPredicted RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 WDR47O94967 919 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 RASGRP1O95267 797 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms