RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TGIF1Q15583 401 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 TYSND1Q2T9J0 566 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ARHGAP40Q5TG30 622 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 TMEM135Q86UB9 458 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 BPHLQ86WA6 291 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 CILP2Q8IUL8 1156 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 RASGRP3Q8IV61 690 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 SLC22A15Q8IZD6 547 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 PDIK1LQ8N165 341 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 OR5AR1Q8NGP9 310 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 OR5K2Q8NHB8 316 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 CFAP61Q8NHU2 1237 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 SKA2Q8WVK7 121 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 SIGLEC10Q96LC7 697 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 FOPNLQ96NB1 174 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 P2RY12Q9H244 342 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 PRORYQ9H606 182 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 C20orf96Q9NUD7 363 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 INTS10Q9NVR2 710 aaKnown RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 SOHLH2Q9NX45 425 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 SEMA5BQ9P283 1151 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 CRYL1Q9Y2S2 319 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 PCM1Q15154 2024 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 IGHV5-51A0A0C4DH38 117 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 C2orf74A8MZ97 194 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 BHMG1C9JSJ3 638 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-218ENST00000489037 TTI1O43156 1089 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 GPC4O75487 556 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 TTC4O95801 387 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 PGAM1P18669 254 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 CHRM3P20309 590 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 ADARP55265 1226 aaKnown RBP13.87□□□□□ -0.19
BRCA1-218ENST00000489037 PPP1CAP62136 330 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 HSD11B2P80365 405 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 ABRQ12979 859 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 BBS9Q3SYG4 887 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 PLEKHS1Q5SXH7 462 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 ZNF470Q6ECI4 717 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 UNC5DQ6UXZ4 953 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 PPP1R3BQ86XI6 285 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 DTX1Q86Y01 620 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 CACNA2D3Q8IZS8 1091 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 NLGN4XQ8N0W4 816 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 NLGN4YQ8NFZ3 816 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-218ENST00000489037 LKAAEAR1Q8TD35 194 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 LPGAT1Q92604 370 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 SNF8Q96H20 258 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 CRELD1Q96HD1 420 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 SLC41A2Q96JW4 573 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 KRT12Q99456 494 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 FANCEQ9HB96 536 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 CPNE5Q9HCH3 593 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 APMAPQ9HDC9 416 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 C1GALT1Q9NS00 363 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 SIDT1Q9NXL6 827 aaKnown RBP13.87□□□□□ -0.19
BRCA1-218ENST00000489037 POMT2Q9UKY4 750 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 RARRES3Q9UL19 164 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 FAM169AQ9Y6X4 670 aa13.87□□□□□ -0.19
BRCA1-218ENST00000489037 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 TEX51A0A1B0GUA7 166 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 PIPSLA2A3N6 862 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 EFCAB8A8MWE9 144 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 BTN3A1O00481 513 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 RAD1O60671 282 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 STK17BO94768 372 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 SLCO2B1O94956 709 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 PKMP14618 531 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 MAP4P27816 1152 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 PRDX3P30048 256 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 KPNA2P52292 529 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 SH3BP2P78314 561 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 DHX9Q08211 1270 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 TUBB3Q13509 450 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 SPANXN3Q5MJ09 141 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 SYT10Q6XYQ8 523 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 MAATS1Q7Z4T9 603 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 RAB42Q8N4Z0 105 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 BBOF1Q8ND07 529 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 MAGEC3Q8TD91 643 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 NKD1Q969G9 470 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 KIAA1143Q96AT1 154 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 ELMO2Q96JJ3 720 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 EBNA1BP2Q99848 306 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 TRIM56Q9BRZ2 755 aaKnown RBP13.86□□□□□ -0.19
BRCA1-218ENST00000489037 EFHD1Q9BUP0 239 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 ULBP3Q9BZM4 244 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 XKR8Q9H6D3 395 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 ACTR10Q9NZ32 417 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 IL1RAPL1Q9NZN1 696 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
BRCA1-218ENST00000489037 SPTBP11277 2137 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 ZCWPW2A0A1B0GU75 182 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 K7ENP7 123 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 BTN3A3O00478 584 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms