RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 HTR3DQ70Z44 454 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 FAM9CQ8IZT9 166 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 PAF1Q8N7H5 531 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 ZNF548Q8NEK5 533 aaPredicted RBP13.93□□□□□ -0.18
ABCB1-207ENST00000488737 FIBINQ8TAL6 211 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 ZNF420Q8TAQ5 688 aaPredicted RBP13.93□□□□□ -0.18
ABCB1-207ENST00000488737 ULK4Q96C45 1275 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 ZNF558Q96NG5 402 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 PIF1Q9H611 641 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 C1orf109Q9NX04 203 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 ZDHHC3Q9NYG2 299 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 VAPAQ9P0L0 249 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 KLQ9UEF7 1012 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 ZNF490Q9ULM2 529 aaPredicted RBP13.93□□□□□ -0.18
ABCB1-207ENST00000488737 PPIL1Q9Y3C6 166 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
ABCB1-207ENST00000488737 SCAMP3O14828 347 aaKnown RBP13.92□□□□□ -0.18
ABCB1-207ENST00000488737 DFNA5O60443 496 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
ABCB1-207ENST00000488737 SNAP29O95721 258 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 KRT6AP02538 564 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 KRT6BP04259 564 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 URODP06132 367 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 ANXA5P08758 320 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 CDK4P11802 303 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 NFKBIAP25963 317 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 GGT5P36269 586 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 KRT6CP48668 564 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 ARSFP54793 590 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 NUP107P57740 925 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 LMAN2Q12907 356 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 PTGR1Q14914 329 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 FAM174BQ3ZCQ3 159 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 GGTA1PQ4G0N0 100 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 PYCR3Q53H96 274 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 TXNDC8Q6A555 127 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 DHRS4L2Q6PKH6 230 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 TPRG1Q6ZUI0 275 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 RGL4Q8IZJ4 473 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 TCAIMQ8N3R3 496 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 LIX1Q8N485 282 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 OR2AP1Q8NGE2 309 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 NPLQ9BXD5 320 aaPredicted RBP13.92□□□□□ -0.18
ABCB1-207ENST00000488737 HIPK3Q9H422 1215 aa13.92□□□□□ -0.18
ABCB1-207ENST00000488737 MRPL17Q9NRX2 175 aaKnown RBP13.92□□□□□ -0.18
ABCB1-207ENST00000488737 ELOVL7A1L3X0 281 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 LOC730098B7Z3J9 87 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 FFAR3O14843 346 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 GSTA4O15217 222 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 GPR42O15529 346 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 PQBP1O60828 265 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SEC22BO75396 215 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SEC24DO94855 1032 aaPredicted RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 CLDN9O95484 217 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 MT-ND1P03886 318 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 ALPLP05186 524 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 PGRP06401 933 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SOX11P35716 441 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 GDF5P43026 501 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 HLCSP50747 726 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 RPS6KA3P51812 740 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 CCL23P55773 120 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SNRPD1P62314 119 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SLC7A9P82251 487 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 EPS8Q12929 822 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 PLEKHG6Q3KR16 790 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 RUNDC3AQ59EK9 446 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 ZDHHC20Q5W0Z9 365 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 ATG9BQ674R7 924 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 CRTC1Q6UUV9 634 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 LRRC70Q7Z2Q7 622 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 NECAB2Q7Z6G3 386 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SVOPLQ8N434 492 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 TMBIM1Q969X1 311 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 ISOC1Q96CN7 298 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 CNDP2Q96KP4 475 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 DNAJB9Q9UBS3 223 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 V9GYQ6 96 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 IGLV3-16A0A075B6K0 115 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 TRBV5-3A0A0A0MS03 114 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 ERN1O75460 977 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 THRBP10828 461 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 PRPH2P23942 346 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 RPL10P27635 214 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 HNRNPFP52597 415 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 PRMT2P55345 433 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 HPCAP84074 193 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 HMGCS1Q01581 520 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 USP39Q53GS9 565 aaKnown RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 SPANXN4Q5MJ08 99 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 TBPL2Q6SJ96 375 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 USP45Q70EL2 814 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 ZSWIM9Q86XI8 627 aa13.91□□□□□ -0.18
ABCB1-207ENST00000488737 CLVS1Q8IUQ0 354 aaPredicted RBP13.91□□□□□ -0.18
ABCB1-207ENST00000488737 OFCC1Q8IZS5 231 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms