RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PCDHGA12O60330 932 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 LYPLA1O75608 230 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 ZNF883P0CG24 379 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 KITP10721 976 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 ESRRAP11474 423 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 COL6A2P12110 1019 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 CTSEP14091 401 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 EZRP15311 586 aaKnown RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 PRKAA2P54646 552 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 MPP1Q00013 466 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 CTBSQ01459 385 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 TUBB3Q13509 450 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 NRROSQ86YC3 692 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 KIAA2013Q8IYS2 634 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 SREK1Q8WXA9 508 aaKnown RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 LPGAT1Q92604 370 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 TCF12Q99081 682 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 CADM1Q9BY67 442 aaKnown RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 P2RY12Q9H244 342 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 MMADHCQ9H3L0 296 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 CAB39LQ9H9S4 337 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 ZNF358Q9NW07 568 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 SPASTQ9UBP0 616 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 SLC23A2Q9UGH3 650 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 FBXO5Q9UKT4 447 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 GPR34Q9UPC5 381 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 ARHGEF17Q96PE2 2063 aaPredicted RBP18.96■□□□□ 0.63
CCM2-216ENST00000488727 DMXL1Q9Y485 3027 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 C4orf47A7E2U8 309 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 NDUFS3O75489 264 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 ACP5P13686 325 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 ZNF7P17097 686 aaPredicted RBP18.96■□□□□ 0.63
CCM2-216ENST00000488727 AK4P27144 223 aaPredicted RBP18.96■□□□□ 0.63
CCM2-216ENST00000488727 PPARGP37231 505 aaPredicted RBP18.96■□□□□ 0.63
CCM2-216ENST00000488727 PRLHRP49683 370 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 IRF9Q00978 393 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 BCL7AQ4VC05 210 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 C2CD4AQ8NCU7 369 aaPredicted RBP18.96■□□□□ 0.63
CCM2-216ENST00000488727 GPBAR1Q8TDU6 330 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 ZNF514Q96K75 400 aaPredicted RBP18.96■□□□□ 0.63
CCM2-216ENST00000488727 CCDC106Q9BWC9 280 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 NMRAL1Q9HBL8 299 aa18.96■□□□□ 0.63
CCM2-216ENST00000488727 UBA6A0AVT1 1052 aaPredicted RBP18.95■□□□□ 0.62
CCM2-216ENST00000488727 PRMT5O14744 637 aaPredicted RBP18.95■□□□□ 0.62
CCM2-216ENST00000488727 KMOO15229 486 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 GSC2O15499 205 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 GIMD1P0DJR0 217 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 GABRB3P28472 473 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 ELOCQ15369 112 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 ACVR1CQ8NER5 493 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 BIRC8Q96P09 236 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 INTS10Q9NVR2 710 aaKnown RBP18.95■□□□□ 0.62
CCM2-216ENST00000488727 GULP1Q9UBP9 304 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 SLC39A10Q9ULF5 831 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 CRYL1Q9Y2S2 319 aa18.95■□□□□ 0.62
CCM2-216ENST00000488727 PTPRZ1P23471 2315 aaPredicted RBP18.95■□□□□ 0.62
CCM2-216ENST00000488727 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 AP2A2O94973 939 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 AHSGP02765 367 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 ARRB2P32121 409 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 GMPRP36959 345 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 ABCG1P45844 678 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 LRP8Q14114 963 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 CTSL3PQ5NE16 218 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 STPG1Q5TH74 334 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 RINLQ6ZS11 566 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 KIAA0408Q6ZU52 694 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 TREML1Q86YW5 311 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 FSTL5Q8N475 847 aaPredicted RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 CFAP61Q8NHU2 1237 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 SCG3Q8WXD2 468 aaKnown RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 EBF4Q9BQW3 602 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 TIMM29Q9BSF4 260 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 NOP53Q9NZM5 478 aaKnown RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 ARMCX1Q9P291 453 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 TAGLN3Q9UI15 199 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 TLK1Q9UKI8 766 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 KCNK6Q9Y257 313 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 PRR19A6NJB7 356 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 ZNF195O14628 629 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 YY2O15391 372 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 GYG2O15488 501 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 FFAR2O15552 330 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 PEX11AO75192 247 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 POP7O75817 140 aaKnown RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 CD59P13987 128 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 RPS3P23396 243 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCM2-216ENST00000488727 LEPRP48357 1165 aaKnown RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 ILF3Q12906 894 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCM2-216ENST00000488727 DEFB133Q30KQ1 61 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 UAP1L1Q3KQV9 507 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 CNSTQ6PJW8 725 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 XKR5Q6UX68 686 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 ZYG11AQ6WRX3 759 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 ATG14Q6ZNE5 492 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 DBX2Q6ZNG2 339 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 LKAAEAR1Q8TD35 194 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 LINC00615Q96LM1 132 aaPredicted RBP18.94■□□□□ 0.62
CCM2-216ENST00000488727 TSNARE1Q96NA8 513 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms