RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 H1F0P07305 194 aaKnown RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 F7P08709 466 aaPredicted RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 LINGO3P0C6S8 592 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 OR2T7P0C7T2 308 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 SMIM18P0DKX4 95 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 AMD1P17707 334 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 MSH3P20585 1137 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 AZGP1P25311 298 aaKnown RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 MARK3P27448 753 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 THOP1P52888 689 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 PITX1P78337 314 aaPredicted RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 DMPKQ09013 629 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 ASPRV1Q53RT3 343 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 MDH1BQ5I0G3 518 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 GRTP1Q5TC63 336 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 ZNF449Q6P9G9 518 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 TMPRSS11FQ6ZWK6 438 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 COMMD2Q86X83 199 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 ARHGAP24Q8N264 748 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 SLC24A4Q8NFF2 622 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 MOSPD2Q8NHP6 518 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 RNF128Q8TEB7 428 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 MRPS27Q92552 414 aaKnown RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 SPDL1Q96EA4 605 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 PSD2Q9BQI7 771 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 AP1M1Q9BXS5 423 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 NOL11Q9H8H0 719 aaKnown RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 UPF2Q9HAU5 1272 aaKnown RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 APOBEC3GQ9HC16 384 aaKnown RBP3.04□□□□□ -1.92
CD46-215ENST00000488596 TCF7L2Q9NQB0 619 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 ZFP57Q9NU63 452 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 TAAR2Q9P1P5 351 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 SLC24A2Q9UI40 661 aa3.04□□□□□ -1.92
CD46-215ENST00000488596 SOS1Q07889 1333 aaPredicted RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 A0A1W2PPI3 338 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 MED19A0JLT2 244 aaPredicted RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 TMEM221A6NGB7 291 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 OR6C76A6NM76 312 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 A8MXE2 369 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 TRIM77I1YAP6 450 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 ZNF500O60304 480 aaPredicted RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 OR10H2O60403 315 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 PDE9AO76083 593 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 OR52Z1P0C646 297 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 DANCRP0C864 163 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 PTPN3P26045 913 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 EEF1DP29692 281 aaKnown RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 CDH11P55287 796 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 HSPB3Q12988 150 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 KIR2DS3Q14952 304 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 NR1D2Q14995 579 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 RBBP5Q15291 538 aaKnown RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 VWC2Q2TAL6 325 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 PHLDA2Q53GA4 152 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 KRT80Q6KB66 452 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 CORO6Q6QEF8 472 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 GDPD4Q6W3E5 623 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 ZBTB49Q6ZSB9 765 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 FAM47EQ6ZV65 393 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 CENPVQ7Z7K6 275 aaPredicted RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 TMPRSS11BQ86T26 416 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 RFLNBQ8N5W9 214 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 CPSF7Q8N684 471 aaKnown RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 METTL27Q8N6F8 245 aaPredicted RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 PAPD5Q8NDF8 572 aaKnown RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 OLIG1Q8TAK6 271 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 HES6Q96HZ4 224 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 ST6GAL2Q96JF0 529 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 ZMAT2Q96NC0 199 aaKnown RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 LMF2Q9BU23 707 aaKnown RBP3.03□□□□□ -1.92
CD46-215ENST00000488596 WNT5BQ9H1J7 359 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 ANKZF1Q9H8Y5 726 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 MYNNQ9NPC7 610 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 B3GAT1Q9P2W7 334 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 OSGIN1Q9UJX0 560 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 PADI2Q9Y2J8 665 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 CCL27Q9Y4X3 112 aa3.03□□□□□ -1.92
CD46-215ENST00000488596 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 DUXAA6NLW8 204 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 E9PI62 339 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 BMPR1BO00238 502 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 LMX1BO60663 402 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 NR3C1P04150 777 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 CYP11B2P19099 503 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 MPZP25189 248 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 PCGF2P35227 344 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 SLC9A3P48764 834 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 HOXA1P49639 335 aaPredicted RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 RAB28P51157 221 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 ZNF75DP51815 510 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 RAD23AP54725 363 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 RPS18P62269 152 aaKnown RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 RBPJQ06330 500 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 MFAP5Q13361 173 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 RBM39Q14498 530 aaKnown RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 TCP11X2Q5H9J9 407 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 KRBOX4Q5JUW0 171 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 ARMC4Q5T2S8 1044 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 CST9LP1Q5W188 147 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 FAM198BQ6UWH4 519 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms