RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	CNOT3	O75175	753 aa	Known RBP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	PYGM	P11217	842 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	TNNT1	P13805	278 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	OTX2	P32243	289 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	MSLN	Q13421	630 aa	Predicted RBP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	OLIG2	Q13516	323 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	ZRANB3	Q5FWF4	1079 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	CAVIN1	Q6NZI2	390 aa	Known RBP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	IGFL3	Q6UXB1	125 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	BZW1	Q7L1Q6	419 aa	Known RBP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	PID1	Q7Z2X4	250 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	RAB43	Q86YS6	212 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	TMEM151B	Q8IW70	566 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	ADGRF3	Q8IZF5	1079 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	OR4K2	Q8NGD2	314 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	OR52E1	Q8NGJ3	308 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	HM13	Q8TCT9	377 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	DNAJC7	Q99615	494 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	CCM2	Q9BSQ5	444 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	DHRS4	Q9BTZ2	278 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	TFB2M	Q9H5Q4	396 aa	Known RBP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	ZNF552	Q9H707	407 aa	Predicted RBP	10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	FAM60A	Q9NP50	221 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	IFNK	Q9P0W0	207 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	SERTAD3	Q9UJW9	196 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	HEBP2	Q9Y5Z4	205 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	CROCC	Q5TZA2	2017 aa		10.99	□□□□□ -0.65
SNU13-208	ENST00000488571	CCDC66	A2RUB6	948 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	ANKUB1	A6NFN9	424 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571		C9J4A7	227 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	LDB2	O43679	373 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	AVP	P01185	164 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	CBSL	P0DN79	551 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	COMT	P21964	271 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	PDHA2	P29803	388 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	ADRA1A	P35348	466 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	CBS	P35520	551 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	HADHA	P40939	763 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	TNNT3	P45378	269 aa	Predicted RBP	10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	GABRA4	P48169	554 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	FOXL2	P58012	376 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	TFDP2	Q14188	446 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	KRT33B	Q14525	404 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	MYBPC3	Q14896	1274 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	TAF1A	Q15573	450 aa	Predicted RBP	10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	KYNU	Q16719	465 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	DCAF10	Q5QP82	559 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	C1QL3	Q5VWW1	255 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	KAZN	Q674X7	775 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	RANBP10	Q6VN20	620 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	MICALCL	Q6ZW33	695 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	RHOT2	Q8IXI1	618 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	GALNT16	Q8N428	558 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	PHC3	Q8NDX5	983 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	OR13C4	Q8NGS5	318 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	HAUS1	Q96CS2	278 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	RBM41	Q96IZ5	413 aa	Known RBP	10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	C5orf34	Q96MH7	638 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	IP6K3	Q96PC2	410 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	GBP5	Q96PP8	586 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	FERD3L	Q96RJ6	166 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	VAT1	Q99536	393 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	FICD	Q9BVA6	458 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	FSD1L	Q9BXM9	530 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	GBA3	Q9H227	469 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	XKR8	Q9H6D3	395 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	COG4	Q9H9E3	785 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	ZBTB20	Q9HC78	741 aa	Predicted RBP	10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	SPTLC3	Q9NUV7	552 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	RSPH14	Q9UHP6	348 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	PADI2	Q9Y2J8	665 aa		10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	TEP1	Q99973	2627 aa	Known RBP	10.98	□□□□□ -0.65
SNU13-208	ENST00000488571	IGLV3-16	A0A075B6K0	115 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	hCG_1818297	A0A087WSY0	165 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	C17orf113	A0A1B0GUU1	675 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	C2orf81	A6NN90	581 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	C2orf74	A8MZ97	194 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	AKR1B10	O60218	316 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	CTSB	P07858	339 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	HBQ1	P09105	142 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	AGXT	P21549	392 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	SLC1A1	P43005	524 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	TPM4	P67936	248 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	BOP1	Q14137	746 aa	Known RBP	10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	SSPN	Q14714	243 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	TCEAL1	Q15170	157 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	ZIC1	Q15915	447 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	DEFB110	Q30KQ9	67 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	ODF2	Q5BJF6	829 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	MLIP	Q5VWP3	458 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	RHBDD2	Q6NTF9	364 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	SPESP1	Q6UW49	350 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571		Q6ZS92	163 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	CUZD1	Q86UP6	607 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	AMIGO1	Q86WK6	493 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	NXPE1	Q8N323	547 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	C19orf47	Q8N9M1	422 aa	Known RBP	10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	CLEC1A	Q8NC01	280 aa		10.97	□□□□□ -0.65
SNU13-208	ENST00000488571	OR8K1	Q8NGG5	319 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms