RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CENPFP49454 3210 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 EIF3AQ14152 1382 aaKnown RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 ABCC11Q96J66 1382 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 USP47Q96K76 1375 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 PRUNE2Q8WUY3 3088 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 LOC100509620A0A075B734 347 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 B4DLN1 442 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 VILLO15195 856 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 NDUFS4O43181 175 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 SLC22A3O75751 556 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 TPPPO94811 219 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 INHBAP08476 426 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 PAX1P15863 534 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 CAPN3P20807 821 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 CDKN1AP38936 164 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 ARSEP51690 589 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 MRPL12P52815 198 aaKnown RBP4.12□□□□□ -1.75
ITGB1-214ENST00000488427 DMP1Q13316 513 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-214ENST00000488427 KRT33BQ14525 404 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 DUOXA1Q1HG43 343 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 FAM109BQ6ICB4 259 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-214ENST00000488427 Q7L0L9 218 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 FASTKD5Q7L8L6 764 aaKnown RBP4.12□□□□□ -1.75
ITGB1-214ENST00000488427 RASGEF1CQ8N431 466 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 HMGCLL1Q8TB92 370 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 SLC44A1Q8WWI5 657 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 SMPDL3BQ92485 455 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 STAMBPL1Q96FJ0 436 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 CHMP4AQ9BY43 222 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 ZFP57Q9NU63 452 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 PSD3Q9NYI0 1048 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 FBXL17Q9UF56 701 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 ZNF711Q9Y462 761 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 EPG5Q9HCE0 2579 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 ACEP12821 1306 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 DAPK1P53355 1430 aa4.12□□□□□ -1.75
ITGB1-214ENST00000488427 ITGB4P16144 1822 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 AFDNP55196 1824 aaKnown RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ANKRD11Q6UB99 2663 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 NOTCH4Q99466 2003 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 A0A1W2PP11 408 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 A0A1W2PPI3 338 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 FSD2A1L4K1 749 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 HMGB1P1B2RPK0 211 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 TMEM178BH3BS89 294 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 CLIC2O15247 247 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 PCDH7O60245 1069 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 RNF224P0DH78 156 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 VPREB1P12018 145 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ALOX12P18054 663 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 GABRB1P18505 474 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 TM4SF1P30408 202 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ARCN1P48444 511 aaKnown RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 EIF5P55010 431 aaKnown RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 MRPS5P82675 430 aaKnown RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 CHAF1BQ13112 559 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 KIR2DS3Q14952 304 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ITPRIPL1Q6GPH6 555 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 SLC35E4Q6ICL7 350 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 SLC27A1Q6PCB7 646 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 GSG1LQ6UXU4 331 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 CFAP77Q6ZQR2 320 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ZNF771Q7L3S4 317 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 GBGT1Q8N5D6 347 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 MCUQ8NE86 351 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 SLC24A4Q8NFF2 622 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 SMC6Q96SB8 1091 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 TEX12Q9BXU0 123 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 OSGEPL1Q9H4B0 414 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 DENND2DQ9H6A0 471 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 DNAJC18Q9H819 358 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ZBTB20Q9HC78 741 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-214ENST00000488427 PNMA2Q9UL42 364 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 NSD2O96028 1365 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 ANKRD36BQ8N2N9 1353 aa4.11□□□□□ -1.75
ITGB1-214ENST00000488427 EYSQ5T1H1 3165 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SETXQ7Z333 2677 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 A0A0G2JNG1 304 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 TMEM8BA6NDV4 472 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 MITFO75030 526 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 PTP4A3O75365 173 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 H1F0P07305 194 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SP1P08047 785 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SAT1P21673 171 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 HRH2P25021 359 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 MARK3P27448 753 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 EPHX2P34913 555 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 MFAP4P55083 255 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 RPL24P83731 157 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 KIR2DS5Q14953 304 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 C15orf59Q2T9L4 293 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 ZNF628Q5EBL2 1059 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 NDUFAF5Q5TEU4 345 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SFMBT2Q5VUG0 894 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 Q75L30 129 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SMIM29Q86T20 159 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 GPALPP1Q8IXQ4 340 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 SCYL3Q8IZE3 742 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms