RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TSPY8P0CW00 308 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 FDPSP14324 419 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 HSPA4P34932 840 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 RAD23AP54725 363 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 RPL24P83731 157 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 TSPY1Q01534 308 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 DMP1Q13316 513 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 COG2Q14746 738 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ELFN2Q5R3F8 820 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 PLA2G4FQ68DD2 849 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 TEX38Q6PEX7 206 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ZNF852Q6ZMS4 543 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 TRMT1LQ7Z2T5 733 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ATG9AQ7Z3C6 839 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ADCK2Q7Z695 626 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SLFN11Q7Z7L1 901 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 COMMD2Q86X83 199 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 CFAP206Q8IYR0 622 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 CNBD1Q8NA66 436 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 TDRD5Q8NAT2 981 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 OR2AJ1Q8NGZ0 328 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SPATA20Q8TB22 786 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 TAS1R2Q8TE23 839 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ZNF473Q8WTR7 871 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SECISBP2LQ93073 1101 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 VPS33AQ96AX1 596 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SPDL1Q96EA4 605 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ZNF354BQ96LW1 612 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 ZNF830Q96NB3 372 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 PPIL3Q9H2H8 161 aaKnown RBP3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SLA2Q9H6Q3 261 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 TBC1D17Q9HA65 648 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SPHK1Q9NYA1 384 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 NPAP1Q9NZP6 1156 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 SLC7A7Q9UM01 511 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 CCL27Q9Y4X3 112 aa3.54□□□□□ -1.84
HMGB1P36-201ENST00000487709 A0A0G2JLW4 131 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 A8MXE2 369 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 FAM72CH0Y354 149 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 H7C0S8 307 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 CTSVO60911 334 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 PSMD10O75832 226 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 BAG4O95429 457 aaKnown RBP3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 MC5RP33032 325 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 ASCL1P50553 236 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 BRWD1-AS2P59051 145 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 CX3CL1P78423 397 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 MBTD1Q05BQ5 628 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 CAMK2DQ13557 499 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 MDH1BQ5I0G3 518 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 KRBOX4Q5JUW0 171 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 SPECC1Q5M775 1068 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 FAM72AQ5TYM5 149 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 FAM72DQ6L9T8 149 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 RPUSD3Q6P087 351 aaKnown RBP3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 PLXDC2Q6UX71 529 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 DENND5BQ6ZUT9 1274 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 DSG4Q86SJ6 1040 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 ADIPOR2Q86V24 386 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 FAM72BQ86X60 149 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 FAM114A1Q8IWE2 563 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 RYBPQ8N488 228 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 ZNF611Q8N823 705 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 XXYLT1Q8NBI6 393 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 ROBO4Q8WZ75 1007 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 MOB3AQ96BX8 217 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 ST6GAL2Q96JF0 529 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 SGK494Q96LW2 274 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 UHRF2Q96PU4 802 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 FERMT1Q9BQL6 677 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 C16orf70Q9BSU1 422 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 TRAF4Q9BUZ4 470 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 ABHD6Q9BV23 337 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 GOLPH3LQ9H4A5 285 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 TFB2MQ9H5Q4 396 aaKnown RBP3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 CNOT10Q9H9A5 744 aaKnown RBP3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 LRRC4Q9HBW1 653 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 GKN1Q9NS71 199 aa3.53□□□□□ -1.84
HMGB1P36-201ENST00000487709 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 CLDN4O14493 209 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 WDR46O15213 610 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 RNASEH1O60930 286 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 TADA2AO75478 443 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 INHBAP08476 426 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 QDPRP09417 244 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 FGF5P12034 268 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 EPHA2P29317 976 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 DLX5P56178 289 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRKCZQ05513 592 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 RUNX1T1Q06455 604 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZRSR1Q15695 479 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 STXBP5Q5T5C0 1151 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 RNASEH2BQ5TBB1 312 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 C11orf63Q6NUN7 778 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 LINGO4Q6UY18 593 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 RBPMS2Q6ZRY4 209 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZBTB49Q6ZSB9 765 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 ERN2Q76MJ5 926 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC26A9Q7LBE3 791 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 PLPPR4Q7Z2D5 763 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms