RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 XKR8Q9H6D3 395 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 SLC6A20Q9NP91 592 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 ACTR10Q9NZ32 417 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 DHCR7Q9UBM7 475 aaKnown RBP14.83□□□□□ -0.04
MCF2L-228ENST00000487354 FKBPLQ9UIM3 349 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 CCDC168Q8NDH2 2452 aa14.83□□□□□ -0.04
MCF2L-228ENST00000487354 MED13LQ71F56 2210 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 SRP72O76094 671 aaKnown RBP14.82□□□□□ -0.04
MCF2L-228ENST00000487354 STSP08842 583 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 EDN3P14138 238 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 DYNLT1P63172 113 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 MSLNQ13421 630 aaPredicted RBP14.82□□□□□ -0.04
MCF2L-228ENST00000487354 GSE1Q14687 1217 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 NFKBIBQ15653 356 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 TAZQ16635 292 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 SPESP1Q6UW49 350 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 ZNF567Q8N184 647 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 IPMKQ8NFU5 416 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 PROKR1Q8TCW9 393 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.82□□□□□ -0.04
MCF2L-228ENST00000487354 TM9SF4Q92544 642 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 FCRL5Q96RD9 977 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 CCM2Q9BSQ5 444 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 DEF6Q9H4E7 631 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 COG4Q9H9E3 785 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 AGPAT4Q9NRZ5 378 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 ICKQ9UPZ9 632 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 PKP3Q9Y446 797 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 HEBP2Q9Y5Z4 205 aa14.82□□□□□ -0.04
MCF2L-228ENST00000487354 CCDC78A2IDD5 438 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 CCDC66A2RUB6 948 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 C2orf74A8MZ97 194 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 PRSS44E7EML9 344 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 AGPSO00116 658 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 PEX12O00623 359 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 SOCS6O14544 535 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 OR2B3O76000 313 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 IGHEP01854 428 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 KRT1P04264 644 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 TPBGLP0DKB5 382 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 PDHA2P29803 388 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 DCDP81605 110 aaKnown RBP14.81□□□□□ -0.04
MCF2L-228ENST00000487354 ZBED6P86452 979 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 TMPRSS15P98073 1019 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 BOP1Q14137 746 aaKnown RBP14.81□□□□□ -0.04
MCF2L-228ENST00000487354 MESDQ14696 234 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 MFSD7Q6UXD7 560 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 AMIGO1Q86WK6 493 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 RFX6Q8HWS3 928 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 PHC3Q8NDX5 983 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 OR4K2Q8NGD2 314 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 FAR1Q8WVX9 515 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 PTERQ96BW5 349 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 OR2A14Q96R47 310 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 FERD3LQ96RJ6 166 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 C17orf62Q9BQA9 187 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 HGH1Q9BTY7 390 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 SLC7A5P2Q9GIP4 190 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 CHRNA10Q9GZZ6 450 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 ASB8Q9H765 288 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 ATP13A2Q9NQ11 1180 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 FBXL4Q9UKA2 621 aa14.81□□□□□ -0.04
MCF2L-228ENST00000487354 NCOA6Q14686 2063 aaPredicted RBP14.81□□□□□ -0.04
MCF2L-228ENST00000487354 STX7O15400 261 aaKnown RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 ZSCAN9O15535 394 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 KLHL41O60662 606 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 GYPCP04921 128 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 H2AFZP0C0S5 128 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 PYGMP11217 842 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 UGT2B7P16662 529 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 ITGA3P26006 1051 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 TDGF1P3P51864 188 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 PER3P56645 1201 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 AIMP2Q13155 320 aaKnown RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 OLIG2Q13516 323 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 IQCB1Q15051 598 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 ASTE1Q2TB18 679 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 NKAIN1Q4KMZ8 207 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 ZNF324BQ6AW86 544 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 H2AFVQ71UI9 128 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 FJX1Q86VR8 437 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 GPR135Q8IZ08 494 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 ZNF655Q8N720 491 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 RNF25Q96BH1 459 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 MOCOSQ96EN8 888 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 RBM41Q96IZ5 413 aaKnown RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 MESP1Q9BRJ9 268 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 SPHK1Q9NYA1 384 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 IFT80Q9P2H3 777 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-228ENST00000487354 CAPN11Q9UMQ6 739 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 AP1M2Q9Y6Q5 423 aa14.8□□□□□ -0.04
MCF2L-228ENST00000487354 IGLV3-16A0A075B6K0 115 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 C17orf113A0A1B0GUU1 675 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 AGTP01019 485 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 ZFXP17010 805 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 PEBP1P30086 187 aaKnown RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 CDKN2BP42772 138 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 Q0VFX4 171 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 PRKG2Q13237 762 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms