RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 FBXO48Q5FWF7 155 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 KANK2Q63ZY3 851 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 METTL2BQ6P1Q9 378 aaKnown RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 PNCKQ6P2M8 343 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ADAMTSL4Q6UY14 1074 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ACTRT2Q8TDY3 377 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ASB12Q8WXK4 309 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 GLMNQ92990 594 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 BIRC7Q96CA5 298 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 LENG8Q96PV6 779 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 ZNF385DQ9H6B1 395 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 SEMA4BQ9NPR2 832 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 FIS1Q9Y3D6 152 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 SLC16A5O15375 505 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 TAPBPO15533 448 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ESRRAP11474 423 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 PTPN4P29074 926 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 AVPR2P30518 371 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 CCR5P51681 352 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 INPP5AQ14642 412 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ZNF658BQ4V348 819 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 CLEC6AQ6EIG7 209 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 SULT1C3Q6IMI6 304 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 TRIM74Q86UV6 250 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 DEFB119Q8N690 84 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 BEND7Q8N7W2 519 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ASB11Q8WXH4 323 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 RHBDF1Q96CC6 855 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 PPP1R36Q96LQ0 422 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 ZNF382Q96SR6 550 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 HGH1Q9BTY7 390 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 C1QTNF7Q9BXJ2 289 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 SLC12A9Q9BXP2 914 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
CUX1-209ENST00000487284 C11orf16Q9NQ32 467 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 TAGLN3Q9UI15 199 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 CA5BQ9Y2D0 317 aa13.88□□□□□ -0.19
CUX1-209ENST00000487284 A0A1B0GTL3 188 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 SLC5A10A0PJK1 596 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 H0YHG0 523 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 GFYI3L273 518 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 SLC22A2O15244 555 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 LILRB5O75023 590 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 ESRRBO95718 433 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 ENO1P06733 434 aaKnown RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 NQO1P15559 274 aaKnown RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 NCF2P19878 526 aaPredicted RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 HNRNPA2B1P22626 353 aaKnown RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 PKNOX1P55347 436 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 KCNJ2P63252 427 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 CDC16Q13042 620 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 TMEM220Q6QAJ8 160 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 WDR5BQ86VZ2 330 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 LONP2Q86WA8 852 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 KIF2BQ8N4N8 673 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 CPSF7Q8N684 471 aaKnown RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 DENND6BQ8NEG7 585 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 CEP70Q8NHQ1 597 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 SNX19Q92543 992 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 ESAMQ96AP7 390 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 COX14Q96I36 57 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 ZNF514Q96K75 400 aaPredicted RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 EGFL8Q99944 293 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 TMEM79Q9BSE2 394 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 NUSAP1Q9BXS6 441 aaKnown RBP13.87□□□□□ -0.19
CUX1-209ENST00000487284 PARVBQ9HBI1 364 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 TRIM39Q9HCM9 518 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 PDE10AQ9Y233 779 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 DNAJC15Q9Y5T4 150 aa13.87□□□□□ -0.19
CUX1-209ENST00000487284 THADAQ6YHU6 1953 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 WDFY4Q6ZS81 3184 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 CUL9Q8IWT3 2517 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 POM121BA6NF01 834 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 TMEM202A6NGA9 273 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 H0Y8X5 98 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 VEGFDO43915 354 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 GPR37L1O60883 481 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 MATN4O95460 622 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 GUCA1CO95843 209 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 GSTM1P09488 218 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
CUX1-209ENST00000487284 FOXA1P55317 472 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 CLDN2P57739 230 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 CDK3Q00526 305 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 GSTM4Q03013 218 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 C18orf21Q32NC0 220 aaPredicted RBP13.86□□□□□ -0.19
CUX1-209ENST00000487284 TTC23LQ6PF05 361 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 SLC36A4Q6YBV0 504 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 GPRIN3Q6ZVF9 776 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 CHSY3Q70JA7 882 aa13.86□□□□□ -0.19
CUX1-209ENST00000487284 UBE2R2Q712K3 238 aaPredicted RBP13.86□□□□□ -0.19
CUX1-209ENST00000487284 GOLGA7Q7Z5G4 137 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms