RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C1orf189Q5VU69 101 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 OR11G2Q8NGC1 345 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 ZFPM2Q8WW38 1151 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 RNF32Q9H0A6 362 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 FAM83DQ9H4H8 585 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 HAUS4Q9H6D7 363 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 SP110Q9HB58 689 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 ARFGAP3Q9NP61 516 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 LZTFL1Q9NQ48 299 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 IL17CQ9P0M4 197 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 FZD10Q9ULW2 581 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 AP1M2Q9Y6Q5 423 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 CHD3Q12873 2000 aaKnown RBP11.25□□□□□ -0.61
TRIM56-204ENST00000487252 RGSL1A5PLK6 1076 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 OR6C74A6NCV1 312 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 ATE1O95260 518 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 CLDN7O95471 211 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 ONECUT2O95948 504 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-204ENST00000487252 HALP42357 657 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 PMP22Q01453 160 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 PAMR1Q6UXH9 720 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 CDHR3Q6ZTQ4 885 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 NDUFAF2Q8N183 169 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 SYN2Q92777 582 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-204ENST00000487252 SPSB2Q99619 263 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 CARD6Q9BX69 1037 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 CLEC4MQ9H2X3 399 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-204ENST00000487252 ZNF395Q9H8N7 513 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-204ENST00000487252 WDR54Q9H977 334 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 MRM3Q9HC36 420 aaKnown RBP11.24□□□□□ -0.61
TRIM56-204ENST00000487252 RASSF1Q9NS23 344 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
TRIM56-204ENST00000487252 APEX2Q9UBZ4 518 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 TRIM10Q9UDY6 481 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 CDC23Q9UJX2 597 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
TRIM56-204ENST00000487252 ANK3Q12955 4377 aaKnown RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 FAM237BA0A1B0GVD1 139 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 EPHB6O15197 1021 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 SLC25A14O95258 325 aaPredicted RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 LSM8O95777 96 aaKnown RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 TPOP07202 933 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 ST6GAL1P15907 406 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 CDH3P22223 829 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 LMAN1P49257 510 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 AIF1P55008 147 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 PPP2R2BQ00005 443 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 APBA1Q02410 837 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 GALNT3Q14435 633 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 SLC9A5Q14940 896 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 ERCC6LQ2NKX8 1250 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 CCDC40Q4G0X9 1142 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 ZNF569Q5MCW4 686 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 GPR135Q8IZ08 494 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 EID3Q8N140 333 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 MARVELD2Q8N4S9 558 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 CPSF7Q8N684 471 aaKnown RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 NPWQ8N729 165 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 SIMC1Q8NDZ2 872 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 MNS1Q8NEH6 495 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 ASB5Q8WWX0 329 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 FKBP10Q96AY3 582 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 UCK2Q9BZX2 261 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 SLC26A1Q9H2B4 701 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 FAM53CQ9NYF3 392 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 LRFN1Q9P244 771 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 DHCR7Q9UBM7 475 aaKnown RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 SLC24A2Q9UI40 661 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 MRPS2Q9Y399 296 aaKnown RBP11.23□□□□□ -0.61
TRIM56-204ENST00000487252 L3MBTL1Q9Y468 752 aa11.23□□□□□ -0.61
TRIM56-204ENST00000487252 FOXN3O00409 490 aaPredicted RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 KLK8O60259 260 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 KCNJ13O60928 360 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 USP1O94782 785 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 PRAMEF1O95521 474 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 WDPCPO95876 746 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 HPP00738 406 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 PRLP01236 227 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 ALBP02768 609 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 RAF1P04049 648 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 MTHFD1P11586 935 aaKnown RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 SLC9A1P19634 815 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 ITGAXP20702 1163 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 GCGRP47871 477 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 GABRA4P48169 554 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 TPI1P60174 286 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 NOMO3P69849 1222 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 IHHQ14623 411 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 KHDC1Q4VXA5 237 aaKnown RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 ARMC6Q6NXE6 501 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 C3P1Q6ZMU1 363 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 MEGF8Q7Z7M0 2845 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 CDC20BQ86Y33 519 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 SIAH3Q8IW03 269 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms