RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ARL8BQ9NVJ2 186 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ARL15Q9NXU5 204 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 ATXN10Q9UBB4 475 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 FAM8A1Q9UBU6 413 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 SERGEFQ9UGK8 458 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 EIF2B4Q9UI10 523 aaKnown RBP6.9□□□□□ -1.3
SF3A3-206ENST00000487062 TAGLN3Q9UI15 199 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 PDE10AQ9Y233 779 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 CAPN7Q9Y6W3 813 aa6.9□□□□□ -1.3
SF3A3-206ENST00000487062 A0A1W2PQU0 124 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PRR23AA6NEV1 266 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MGAT4DA6NG13 374 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 LRRC72A6NJI9 287 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CAPN14A8MX76 684 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MYO1CO00159 1063 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 E2F3O00716 465 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 UBFD1O14562 309 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 KMOO15229 486 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 TAPBPO15533 448 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 DCXO43602 365 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 NARSO43776 548 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PSIP1O75475 530 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 STK16O75716 305 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 POP7O75817 140 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MATN4O95460 622 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CBX6O95503 412 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PAK4O96013 591 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ENO1P06733 434 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 T-ENOLP0DO92 83 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 NQO1P15559 274 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF8P17098 575 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 HMOX2P30519 316 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 GGT5P36269 586 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 HSPA7P48741 367 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ADPRHP54922 357 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MXRA7P84157 204 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ARHGAP8P85298 464 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CDK3Q00526 305 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PRKCQQ04759 706 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ABRQ12979 859 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 RPA4Q13156 261 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CCINQ13939 588 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 LRRC32Q14392 662 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 IRF4Q15306 451 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MLF2Q15773 248 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 WSCD2Q2TBF2 565 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CLEC6AQ6EIG7 209 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PTCRAQ6ISU1 281 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 KIAA1324Q6UXG2 1013 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF852Q6ZMS4 543 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 LRRC70Q7Z2Q7 622 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MILR1Q7Z6M3 343 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 SYVN1Q86TM6 617 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 LRRTM4Q86VH4 590 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 VRK3Q8IV63 474 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 DDIASQ8IXT1 998 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CFAP206Q8IYR0 622 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 SLC22A15Q8IZD6 547 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ARHGAP24Q8N264 748 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PELI3Q8N2H9 469 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 SYNPOQ8N3V7 929 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CPSF7Q8N684 471 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 TEX9Q8N6V9 391 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 TP53I13Q8NBR0 393 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PLA2G15Q8NCC3 412 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 OR2L2Q8NH16 312 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MAGEC3Q8TD91 643 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 TWIST2Q8WVJ9 160 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 DLG3Q92796 817 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ESAMQ96AP7 390 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 FBXL8Q96CD0 374 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 C19orf60Q96EN9 201 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PTCD3Q96EY7 689 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MRGPRX1Q96LB2 322 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PPP1R36Q96LQ0 422 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MAGEB10Q96LZ2 347 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CCDC138Q96M89 665 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 LENG8Q96PV6 779 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 CDX2Q99626 313 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 TEX101Q9BY14 249 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 LRMDAQ9H2I8 198 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 DPEP2Q9H4A9 486 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 SLC32A1Q9H598 525 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 WDR55Q9H6Y2 383 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 WDR26Q9H7D7 661 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 NOL11Q9H8H0 719 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 IPPKQ9H8X2 491 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 RMI1Q9H9A7 625 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ZBTB26Q9HCK0 441 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 RIC8BQ9NVN3 520 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ARMCX1Q9P291 453 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 NDRG2Q9UN36 371 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 DOLKQ9UPQ8 538 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 ZFR2Q9UPR6 939 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 MRPS17Q9Y2R5 130 aaKnown RBP6.89□□□□□ -1.31
SF3A3-206ENST00000487062 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
SF3A3-206ENST00000487062 REV3LO60673 3130 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms