RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CDK3Q00526 305 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 EMX2Q04743 252 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 DMPKQ09013 629 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 MAD2L1Q13257 205 aaPredicted RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 E2F2Q14209 437 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 FASTKQ14296 549 aaKnown RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 SNCBQ16143 134 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 WSCD2Q2TBF2 565 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 TRMT5Q32P41 509 aaKnown RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 PDCD4Q53EL6 469 aaKnown RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 C10orf62Q5T681 223 aaPredicted RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 C6orf163Q5TEZ5 329 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 UNC5DQ6UXZ4 953 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 NET1Q7Z628 596 aaPredicted RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 SNX32Q86XE0 403 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 SCUBE1Q8IWY4 988 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 DDIASQ8IXT1 998 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 PGAM4Q8N0Y7 254 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 TP53I13Q8NBR0 393 aaPredicted RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 DENND6BQ8NEG7 585 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 OR52B6Q8NGF0 335 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 USP7Q93009 1102 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 ESAMQ96AP7 390 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 TUBGCP3Q96CW5 907 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 PPP3R2Q96LZ3 170 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 SERPINI1Q99574 410 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 BRINP2Q9C0B6 783 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 OR2AG1Q9H205 316 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 MRPL40Q9NQ50 206 aaKnown RBP11.36□□□□□ -0.59
PRKCB-207ENST00000486868 DNAJC11Q9NVH1 559 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 FBXL12Q9NXK8 326 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 ASIC5Q9NY37 505 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 GPRC5BQ9NZH0 403 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 ZIM2Q9NZV7 527 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 GULP1Q9UBP9 304 aa11.36□□□□□ -0.59
PRKCB-207ENST00000486868 CEP290O15078 2479 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 LOC100653049A0A140TA62 436 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 A0A1B0GTL3 188 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 A0A1W2PP55 124 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ARHGEF33A8MVX0 844 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 K7ESM1 405 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 IFRD1O00458 451 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 RGS14O43566 566 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 POP7O75817 140 aaKnown RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CIB2O75838 187 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 KRT34O76011 436 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PCDH8O95206 1070 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CLDN9O95484 217 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 KLF8O95600 359 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 KRT6AP02538 564 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 KRT6BP04259 564 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CAPN1P07384 714 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 SNRPB2P08579 225 aaKnown RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ACPPP15309 386 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ZNF8P17098 575 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ITGAXP20702 1163 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PRPH2P23942 346 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 HNRNPH1P31943 449 aaKnown RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 HSD17B2P37059 387 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CASP2P42575 452 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 WASP42768 502 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CPA2P48052 419 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 KRT6CP48668 564 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PNLIPRP1P54315 467 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 SGCGQ13326 291 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PON2Q15165 354 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 SPATS1Q496A3 300 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 LIPJQ5W064 366 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 Q6ZSR9 355 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 C11orf96Q7Z7L8 435 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 HORMAD1Q86X24 394 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 TRAPPC5Q8IUR0 188 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ZNF547Q8IVP9 402 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ULK2Q8IYT8 1036 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 MIER2Q8N344 545 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 POU5F2Q8N7G0 328 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 BEND7Q8N7W2 519 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CDYL2Q8N8U2 506 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 NAT14Q8WUY8 206 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 SKA2Q8WVK7 121 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 METTL2AQ96IZ6 378 aaKnown RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PPP1R36Q96LQ0 422 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 KCNA7Q96RP8 456 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 MRPL1Q9BYD6 325 aaKnown RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 MKRN2Q9H000 416 aaKnown RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 UBE2ZQ9H832 354 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 HEBP1Q9NRV9 189 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 PHPT1Q9NRX4 125 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-207ENST00000486868 AIG1Q9NVV5 245 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 NCKAP1Q9Y2A7 1128 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 NDUFAF1Q9Y375 327 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 TIMM22Q9Y584 194 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 GPR45Q9Y5Y3 372 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 TRANK1O15050 2925 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 CKAP5Q14008 2032 aa11.35□□□□□ -0.59
PRKCB-207ENST00000486868 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms