RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 EEF1DP29692 281 aaKnown RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 SYKP43405 635 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CCR10P46092 362 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 FMO5P49326 533 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PRIM2P49643 509 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 DNA2P51530 1060 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 MAPK10P53779 464 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CYP4F2P78329 520 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PITX1P78337 314 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 OLR1P78380 273 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 KRT85P78386 507 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ACTN3Q08043 901 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 RALGDSQ12967 914 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 NME3Q13232 169 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 KCNAB2Q13303 367 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 MPP3Q13368 585 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CLCA4Q14CN2 919 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 SKIDA1Q1XH10 827 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CARD16Q5EG05 197 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 TPRG1LQ5T0D9 272 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 MRM1Q6IN84 353 aaKnown RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CLEC18BQ6UXF7 455 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 LRRC31Q6UY01 552 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 MACC1Q6ZN28 852 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 LRRTM4Q86VH4 590 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ZFAND4Q86XD8 727 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 GKN2Q86XP6 184 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 DEFB106AQ8N104 65 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CLEC18CQ8NCF0 446 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ZBTB34Q8NCN2 500 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 FAM13CQ8NE31 585 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 C1orf162Q8NEQ5 155 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 SLC35C1Q96A29 364 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 MAELQ96JY0 434 aaKnown RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 TTC25Q96NG3 672 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 DACH2Q96NX9 599 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PSMB7Q99436 277 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ATP6V0BQ99437 205 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 SPXQ9BT56 116 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CLPBQ9H078 707 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 SIK2Q9H0K1 926 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 EPN3Q9H201 632 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 TCEAL2Q9H3H9 227 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ANO10Q9NW15 660 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ASNSD1Q9NWL6 643 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 HS3ST4Q9Y661 456 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 DOCK4Q8N1I0 1966 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 LRRK1Q38SD2 2015 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 CHD5Q8TDI0 1954 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 A0A0D9SEW6 157 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 LOC100653049A0A140TA62 436 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 IQANK1A0A1B0GTG1 560 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 CXorf51AA0A1B0GTR3 108 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ILVBLA1L0T0 632 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 OR6C65A6NJZ3 312 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 H0YIV9 168 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 STX16-NPEPL1H3BU86 382 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 RNF103O00237 685 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 CASC3O15234 703 aaKnown RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ZW10O43264 779 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 HSF2BPO75031 334 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 KRT34O76011 436 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 TM7SF2O76062 418 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 CNTN5O94779 1100 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 F13A1P00488 732 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 TMIGD3P0DMS9 266 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 KRT5P13647 590 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 PNLIPP16233 465 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 JUNBP17275 347 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ITIH1P19827 911 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 IL10P22301 178 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 CHMP24386 653 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 HTR1BP28222 390 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 OR1E1P30953 314 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 RFC1P35251 1148 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 HAAOP46952 286 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 DIO1P49895 249 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ZNF165P49910 485 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 SERPINH1P50454 418 aaKnown RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 HK3P52790 923 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 POLE2P56282 527 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 GCNT1Q02742 428 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ZFP36L1Q07352 338 aaKnown RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 CBX3Q13185 183 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 STIM1Q13586 685 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 DHX34Q14147 1143 aaKnown RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 DOC2AQ14183 400 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ERV3-1Q14264 604 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 IGFBP7Q16270 282 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 SMUG1Q53HV7 270 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 ZNF805Q5CZA5 627 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 FAM209AQ5JX71 171 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 WIPI1Q5MNZ9 446 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 BRMS1LQ5PSV4 323 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 DENND1BQ6P3S1 775 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 LINGO4Q6UY18 593 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 PARS2Q7L3T8 475 aaKnown RBP6.72□□□□□ -1.33
HDAC3-209ENST00000486618 HDXQ7Z353 690 aa6.72□□□□□ -1.33
HDAC3-209ENST00000486618 SLFN11Q7Z7L1 901 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms