RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 HCRTR1O43613 425 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 PMPCBO75439 489 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 ZWINTO95229 277 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 F13A1P00488 732 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 F10P00742 488 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 CTSBP07858 339 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 MTHFD1P11586 935 aaKnown RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 ERCC2P18074 760 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 POLR2CP19387 275 aaPredicted RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 ITGAXP20702 1163 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 GPD1P21695 349 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 CDH3P22223 829 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 PON1P27169 355 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 HOXC12P31275 282 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 SPAM1P38567 509 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 HALP42357 657 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 AIF1P55008 147 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 BPIFB4P59827 614 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 DMPKQ09013 629 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 CA9Q16790 459 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 TUBB8Q3ZCM7 444 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 ZNF569Q5MCW4 686 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 ZNF468Q5VIY5 522 aaPredicted RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 DPY19L2P1Q6NXN4 242 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 SCYL2Q6P3W7 929 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 C3P1Q6ZMU1 363 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 FAM83HQ6ZRV2 1179 aaPredicted RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 NOP9Q86U38 636 aaKnown RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 DOLPP1Q86YN1 238 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 FAM20CQ8IXL6 584 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 NDUFAF2Q8N183 169 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 MSANTD4Q8NCY6 345 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 AGAP11Q8TF27 550 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 TEKT4Q8WW24 435 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 ZFPM2Q8WW38 1151 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 GLYATL1Q969I3 302 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 DHTKD1Q96HY7 919 aaPredicted RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 GPR137Q96N19 417 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 VKORC1Q9BQB6 163 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 SPRTNQ9H040 489 aaPredicted RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 DHCR7Q9UBM7 475 aaKnown RBP7.94□□□□□ -1.14
XRN1-212ENST00000486211 SLC24A2Q9UI40 661 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 CDC23Q9UJX2 597 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 DNAJC12Q9UKB3 198 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 TMPRSS11EQ9UL52 423 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 DNPEPQ9ULA0 475 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 PSMD13Q9UNM6 376 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 CPAMD8Q8IZJ3 1885 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 GTF3C1Q12789 2109 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 C1orf232A0A0U1RR37 186 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 FAM171A2A8MVW0 826 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 EEF2KO00418 725 aaKnown RBP7.93□□□□□ -1.14
XRN1-212ENST00000486211 PSMA7O14818 248 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 ZNHIT1O43257 154 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 MMEP08473 750 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 PVRP15151 417 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 ALAS2P22557 587 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 GATA4P43694 442 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 GABRA4P48169 554 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 CTSCP53634 463 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 STX17P56962 302 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 PSMA6P60900 246 aaKnown RBP7.93□□□□□ -1.14
XRN1-212ENST00000486211 PTP4A2Q12974 167 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 MYBPHQ13203 477 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 ARMC6Q6NXE6 501 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 WDR59Q6PJI9 974 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 RFX8Q6ZV50 586 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 CAMKMTQ7Z624 323 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 MARVELD2Q8N4S9 558 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 GPR26Q8NDV2 337 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 LILRB4Q8NHJ6 448 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 CPLX3Q8WVH0 158 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 TRIM11Q96F44 468 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 GSDMAQ96QA5 445 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 POLDIP3Q9BY77 421 aaKnown RBP7.93□□□□□ -1.14
XRN1-212ENST00000486211 UCK2Q9BZX2 261 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 KIR3DX1Q9H7L2 352 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 FAM60AQ9NP50 221 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 PKD2L2Q9NZM6 624 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 CFAP45Q9UL16 551 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 CHKBQ9Y259 395 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 LUC7L2Q9Y383 392 aaKnown RBP7.93□□□□□ -1.14
XRN1-212ENST00000486211 FHOD1Q9Y613 1164 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 CFAP20Q9Y6A4 193 aaKnown RBP7.93□□□□□ -1.14
XRN1-212ENST00000486211 AP1M2Q9Y6Q5 423 aa7.93□□□□□ -1.14
XRN1-212ENST00000486211 HRNRQ86YZ3 2850 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 RNF212BA8MTL3 300 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 INAFM1C9JVW0 142 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 MAFKO60675 156 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 OR2B3O76000 313 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 CDK14O94921 469 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 GNA14O95837 355 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 WDPCPO95876 746 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 HPP00738 406 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 CYP1A1P04798 512 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 ZSCAN22P10073 491 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 KRT3P12035 628 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 HLA-DPA1P20036 260 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 PRDX3P30048 256 aaKnown RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 MMP13P45452 471 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms