RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 UCK1Q9HA47 277 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 SLC40A1Q9NP59 571 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 INTS10Q9NVR2 710 aaKnown RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 SLC17A6Q9P2U8 582 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 GNPTGQ9UJJ9 305 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 FBXO5Q9UKT4 447 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 ENTPD2Q9Y5L3 495 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 MYO9AB2RTY4 2548 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 HEATR5BQ9P2D3 2071 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 LIN7AO14910 233 aaPredicted RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 NIPSNAP2O75323 286 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 GPC4O75487 556 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 ESR1P03372 595 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 CD1CP29017 333 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 ECHS1P30084 290 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 EPHA4P54764 986 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 CAV1Q03135 178 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 RPA4Q13156 261 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 SQSTM1Q13501 440 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 BOP1Q14137 746 aaKnown RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 SPIDRQ14159 915 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 GPR18Q14330 331 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 IGFBP7Q16270 282 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 ZNF549Q6P9A3 640 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 TMEM26Q6ZUK4 368 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 B3GNT8Q7Z7M8 397 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 ZBED8Q8IZ13 594 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 FAM26EQ8N5C1 309 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 CALML6Q8TD86 181 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 CXorf40BQ96DE9 158 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 C12orf66Q96MD2 445 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 GFM1Q96RP9 751 aaKnown RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 TBC1D10AQ9BXI6 508 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 STN1Q9H668 368 aaKnown RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 FBXO6Q9NRD1 293 aaPredicted RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 OGFRQ9NZT2 677 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 CRYL1Q9Y2S2 319 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 MED16Q9Y2X0 877 aa12.59□□□□□ -0.39
SSR4-211ENST00000486204 CFAP20Q9Y6A4 193 aaKnown RBP12.59□□□□□ -0.39
SSR4-211ENST00000486204 BLACEA4D250 179 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 VIPP01282 170 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 PKMP14618 531 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 AOAHP28039 575 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 ACADLP28330 430 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 GABRB3P28472 473 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 ALDH4A1P30038 563 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 FMO4P31512 558 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 LEPRP48357 1165 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 CD151P48509 253 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 GPLD1P80108 840 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 BIRC2Q13490 618 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 GBX1Q14549 363 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 TBR1Q16650 682 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 GLE1Q53GS7 698 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 PTRHD1Q6GMV3 140 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 RBM44Q6ZP01 1051 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 VRK3Q8IV63 474 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 SLITRK4Q8IW52 837 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 TRIM48Q8IWZ4 208 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 SLC22A15Q8IZD6 547 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 WDR36Q8NI36 951 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 SH3KBP1Q96B97 665 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 SLC38A3Q99624 504 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 SYNDIG1Q9H7V2 258 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 RDH14Q9HBH5 336 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 SAYSD1Q9NPB0 183 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 IMP3Q9NV31 184 aaKnown RBP12.58□□□□□ -0.4
SSR4-211ENST00000486204 MOCS1Q9NZB8 636 aa12.58□□□□□ -0.4
SSR4-211ENST00000486204 F8W8V4 182 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 PFDN6O15212 129 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 HAUS5O94927 633 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 CPNE6O95741 557 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 C1QAP02745 245 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 SSTR1P30872 391 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 FOXK1P85037 733 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
SSR4-211ENST00000486204 BRD3Q15059 726 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 CLPPQ16740 277 aaPredicted RBP12.57□□□□□ -0.4
SSR4-211ENST00000486204 AMZ1Q400G9 498 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 TEDDM1Q5T9Z0 273 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 NKAIN2Q5VXU1 208 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 CNSTQ6PJW8 725 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 GALNT7Q86SF2 657 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 PTRH1Q86Y79 214 aaKnown RBP12.57□□□□□ -0.4
SSR4-211ENST00000486204 SPNS2Q8IVW8 549 aa12.57□□□□□ -0.4
SSR4-211ENST00000486204 RBM12BQ8IXT5 1001 aaKnown RBP12.57□□□□□ -0.4
SSR4-211ENST00000486204 GIMAP7Q8NHV1 300 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms