RNA–Protein interactions for RNA: ENST00000486161.5

PTPRD-211, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-211ENST00000486161 BTBD10Q9BSF8 475 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 ARMC7Q9H6L4 198 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 NOL6Q9H6R4 1146 aaKnown RBP8.11□□□□□ -1.11
PTPRD-211ENST00000486161 PRSS16Q9NQE7 514 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 SIRPGQ9P1W8 387 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 INVSQ9Y283 1065 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 PRAMEF26H0Y7S4 382 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 STX16-NPEPL1H3BU86 382 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 STX16O14662 325 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 RFPL1O75677 317 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 OLFM2O95897 454 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 RPS3P23396 243 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRD-211ENST00000486161 ADRA1AP35348 466 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 WDR4P57081 412 aaKnown RBP8.11□□□□□ -1.11
PTPRD-211ENST00000486161 LSM12Q3MHD2 195 aaKnown RBP8.11□□□□□ -1.11
PTPRD-211ENST00000486161 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 CLEC6AQ6EIG7 209 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 AGTRAPQ6RW13 159 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 PGBD5Q8N414 524 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 MDGA1Q8NFP4 955 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 WBP2Q969T9 261 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 CHFRQ96EP1 664 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 DTD2Q96FN9 168 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 ROGDIQ9GZN7 287 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 MMADHCQ9H3L0 296 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-211ENST00000486161 WDR55Q9H6Y2 383 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-211ENST00000486161 TTC3P53804 2025 aa8.11□□□□□ -1.11
PTPRD-211ENST00000486161 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 MUSKO15146 869 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 IFNA16P05015 189 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ATXN1LP0C7T5 689 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 SRFP11831 508 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 NQO1P15559 274 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ERFP50548 548 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNF140P52738 457 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 FBXW4P57775 412 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 GSTA3Q16772 222 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ACSBG2Q5FVE4 666 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 NEK5Q6P3R8 708 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 PPCDCQ96CD2 204 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 MARK4Q96L34 752 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 HHIPQ96QV1 700 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 KLHL28Q9NXS3 571 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 POLR3HQ9Y535 204 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 CFAP20Q9Y6A4 193 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 OR10H2O60403 315 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ERAL1O75616 437 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 CBX6O95503 412 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ALDOAP04075 364 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 BDKRB1P46663 353 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 KCTD11Q693B1 232 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 CYB5D1Q6P9G0 228 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 GPR26Q8NDV2 337 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 PIH1D2Q8WWB5 315 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 LPGAT1Q92604 370 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 PIGKQ92643 395 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNF707Q96C28 371 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 VPS50Q96JG6 964 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNF556Q9HAH1 456 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ACSS2Q9NR19 701 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 TREX1Q9NSU2 369 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 SNX7Q9UNH6 387 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 SIT1Q9Y3P8 196 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 SIX3O95343 332 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 COX4I1P13073 169 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 FDXRP22570 491 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ALDH4A1P30038 563 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 SHMT2P34897 504 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ARHGAP8P85298 464 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 HSD11B1LQ7Z5J1 315 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNF614Q8N883 585 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 TTC29Q8NA56 475 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 VPS33AQ96AX1 596 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 TMEM245Q9H330 911 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ADGRE2Q9UHX3 823 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 STOML2Q9UJZ1 356 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 MYO1GB0I1T2 1018 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 GPR89AB7ZAQ6 455 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 GPR89BP0CG08 455 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 THEGLP0DJG4 465 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 PRPS2P11908 318 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 FOXN2P32314 431 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 BUD31P41223 144 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 HNRNPKP61978 463 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ZNHIT3Q15649 155 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 TRMT5Q32P41 509 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 PTCHD3Q3KNS1 767 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ICE2Q659A1 982 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 BHLHA9Q7RTU4 235 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 ICA1LQ8NDH6 482 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 MAFAQ8NHW3 353 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 DTX3LQ8TDB6 740 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 NELL1Q92832 810 aa8.1□□□□□ -1.11
PTPRD-211ENST00000486161 GFM2Q969S9 779 aaKnown RBP8.1□□□□□ -1.11
PTPRD-211ENST00000486161 NSMCE2Q96MF7 247 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms