RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CFAP36Q96G28 342 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 B3GNT4Q9C0J1 378 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 CCDC68Q9H2F9 335 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 TRIT1Q9H3H1 467 aaKnown RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 IARS2Q9NSE4 1012 aaKnown RBP12.12□□□□□ -0.47
HMG20B-211ENST00000486028 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 POLG2Q9UHN1 485 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 FBXO5Q9UKT4 447 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 PCDHGA7Q9Y5G6 932 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 TEX264Q9Y6I9 313 aa12.12□□□□□ -0.47
HMG20B-211ENST00000486028 OR5K3A6NET4 321 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 EFCAB7A8K855 629 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 B4E171 279 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 TP73O15350 636 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 TLX3O43711 291 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 KDM1AO60341 852 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 RASSF9O75901 435 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 RPN2P04844 631 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 ANKRD34CP0C6C1 535 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 ERVK-10P10266 1014 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 FGF3P11487 239 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CCL4P13236 92 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PKMP14618 531 aaKnown RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 ITIH1P19827 911 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 TSPAN7P41732 249 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 SLC1A2P43004 574 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 LEPRP48357 1165 aaKnown RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PCBP4P57723 403 aaKnown RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CAV1Q03135 178 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 ABRQ12979 859 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CBLBQ13191 982 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 ZNF789Q5FWF6 425 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CTSL3PQ5NE16 218 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PLEKHS1Q5SXH7 462 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 FAM92BQ6ZTR7 304 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 FAM129CQ86XR2 697 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 DENND6AQ8IWF6 608 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 OR5AR1Q8NGP9 310 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 USP7Q93009 1102 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 TAAR9Q96RI9 348 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CD180Q99467 661 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 HGH1Q9BTY7 390 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 PPANQ9NQ55 473 aaKnown RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-211ENST00000486028 SLC39A1Q9NY26 324 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CHMP2BQ9UQN3 213 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 ASPMQ8IZT6 3477 aa12.11□□□□□ -0.47
HMG20B-211ENST00000486028 E5RI56 91 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 MATN2O00339 956 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 NIPSNAP2O75323 286 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 SLC5A2P31639 672 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 EIF2S3P41091 472 aaKnown RBP12.1□□□□□ -0.47
HMG20B-211ENST00000486028 ETV5P41161 510 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 MC2RQ01718 297 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 FRG1Q14331 258 aaKnown RBP12.1□□□□□ -0.47
HMG20B-211ENST00000486028 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 TTC23LQ6PF05 361 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 UNC5DQ6UXZ4 953 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 UNC5AQ6ZN44 842 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 LRRC69Q6ZNQ3 347 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 KIAA0408Q6ZU52 694 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 PRSS42Q7Z5A4 293 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 AMIGO1Q86WK6 493 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 ANKMY2Q8IV38 441 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 UNC5BQ8IZJ1 945 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 C2CD4AQ8NCU7 369 aaPredicted RBP12.1□□□□□ -0.47
HMG20B-211ENST00000486028 ZNF248Q8NDW4 579 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 OR52E1Q8NGJ3 308 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 OR5K2Q8NHB8 316 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 CFAP61Q8NHU2 1237 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 SKA2Q8WVK7 121 aaPredicted RBP12.1□□□□□ -0.47
HMG20B-211ENST00000486028 UBXN4Q92575 508 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 CERS2Q96G23 380 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 ZNF768Q9H5H4 540 aaKnown RBP12.1□□□□□ -0.47
HMG20B-211ENST00000486028 LATS2Q9NRM7 1088 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 OCIAD1Q9NX40 245 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 KLHL42Q9P2K6 505 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 TDRKHQ9Y2W6 561 aaKnown RBP12.1□□□□□ -0.47
HMG20B-211ENST00000486028 COMMD10Q9Y6G5 202 aa12.1□□□□□ -0.47
HMG20B-211ENST00000486028 A0A087WV48 116 aa12.09□□□□□ -0.47
HMG20B-211ENST00000486028 E7ESA3 106 aa12.09□□□□□ -0.47
HMG20B-211ENST00000486028 EIF3HO15372 352 aaKnown RBP eCLIP12.09□□□□□ -0.47
HMG20B-211ENST00000486028 ZZEF1O43149 2961 aa12.09□□□□□ -0.47
HMG20B-211ENST00000486028 KIF1CO43896 1103 aaKnown RBP12.09□□□□□ -0.47
HMG20B-211ENST00000486028 HAUS5O94927 633 aa12.09□□□□□ -0.47
HMG20B-211ENST00000486028 POLR2CP19387 275 aaPredicted RBP12.09□□□□□ -0.47
HMG20B-211ENST00000486028 ATP5DP30049 168 aa12.09□□□□□ -0.47
HMG20B-211ENST00000486028 SHMT2P34897 504 aa12.09□□□□□ -0.47
HMG20B-211ENST00000486028 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
HMG20B-211ENST00000486028 SEPHS1P49903 392 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms