RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 OR12D3Q9UGF7 316 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 RARRES3Q9UL19 164 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 SNX7Q9UNH6 387 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 TMEM98Q9Y2Y6 226 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 PCYT1BQ9Y5K3 369 aaPredicted RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 INTS1Q8N201 2190 aaKnown RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 FN1P02751 2386 aaKnown RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 STAB1Q9NY15 2570 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 KIR2DS5A0A0G2JLQ3 304 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 A0A0G2JNG1 304 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 BECN2A8MW95 431 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 KIR2DS3K7RE56 304 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 TRAFD1O14545 582 aaPredicted RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 P4HA2O15460 535 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 UBXN7O94888 489 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 HEXIM1O94992 359 aaKnown RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 CYP1A1P04798 512 aaPredicted RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 ALPPP05187 535 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 RAB40ALP0C0E4 278 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 F3P13726 295 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 SLC2A4P14672 509 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 PFKFB1P16118 471 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 NELFEP18615 380 aaKnown RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 CA5AP35218 305 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 CSNK1DP48730 415 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 PDE1BQ01064 536 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 GPS2Q13227 327 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 TUBB3Q13509 450 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 KCNAB1Q14722 419 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 MYBPC3Q14896 1274 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 KIR2DS5Q14953 304 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 RAB6CQ53S08 254 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 FAM102AQ5T9C2 384 aaPredicted RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 CACHD1Q5VU97 1274 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 DUS1LQ6P1R4 473 aaKnown RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 HSD11B1LQ7Z5J1 315 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 MRGPRGQ86SM5 289 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 PHLDB2Q86SQ0 1253 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 SRLQ86TD4 932 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 ZDHHC17Q8IUH5 632 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 ENDOVQ8N8Q3 282 aaKnown RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 AVL9Q8NBF6 648 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 PHOSPHO1Q8TCT1 267 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 FAR1Q8WVX9 515 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 RSC1A1Q92681 617 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 DVL3Q92997 716 aaPredicted RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 MR1Q95460 341 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 C14orf79Q96F83 325 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 SGSM3Q96HU1 749 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 CFAP57Q96MR6 1250 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 TRAPPC9Q96Q05 1148 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 MAGEB5Q9BZ81 275 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 RAB6CQ9H0N0 254 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 L2HGDHQ9H9P8 463 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 UCK1Q9HA47 277 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 PDFQ9HBH1 243 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 WASH6PQ9NQA3 447 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 FGF21Q9NSA1 209 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 MYOTQ9UBF9 498 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 ZNHIT2Q9UHR6 403 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 ST6GALNAC2Q9UJ37 374 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 AJAP1Q9UKB5 411 aaPredicted RBP6.44□□□□□ -1.38
SMC4-217ENST00000485867 KCNK6Q9Y257 313 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 CSAG2Q9Y5P2 127 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 SLC30A1Q9Y6M5 507 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 COL6A5A8TX70 2615 aa6.44□□□□□ -1.38
SMC4-217ENST00000485867 A0A1B0GVL5 298 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 TRIM49BA6NDI0 452 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 TMEM200CA6NKL6 621 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 SNX2O60749 519 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 IPO13O94829 963 aaKnown RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 FOLR1P15328 257 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 AMD1P17707 334 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 TNFAIP3P21580 790 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 LHCGRP22888 699 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 ADRA1BP35368 520 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 TSFMP43897 325 aaKnown RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 GPR1P46091 355 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 CAPZBP47756 277 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 ART1P52961 327 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 SNX16P57768 344 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 YBEYP58557 167 aaPredicted RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 POLR2LP62875 67 aaKnown RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 PPP2R2AP63151 447 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 DPTQ07507 201 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 BCL2L1Q07817 233 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 CETN1Q12798 172 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 MAP4K2Q12851 820 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 DENND2CQ68D51 928 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 LCN10Q6JVE6 187 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 FAM198BQ6UWH4 519 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 FAM92BQ6ZTR7 304 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 TMEM26Q6ZUK4 368 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 Q6ZVL8 140 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 ZADH2Q8N4Q0 377 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 PAF1Q8N7H5 531 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 RTL3Q8N8U3 475 aaKnown RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 SIDT2Q8NBJ9 832 aaKnown RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 SLC38A9Q8NBW4 561 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms