RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PLAGL1Q9UM63 463 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 NFS1Q9Y697 457 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CCDC187A0A096LP49 1063 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 FAM95CA0A1B0GW59 222 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 FAM221BA6H8Z2 402 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 FAM159BA6NKW6 160 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 CXorf49A8MYA2 514 aaPredicted RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 CAPN5O15484 640 aaPredicted RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 SPAG6O75602 509 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 ACSL3O95573 720 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 ATP5DP30049 168 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 CCKBRP32239 447 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 CDKN2DP55273 166 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 SQSTM1Q13501 440 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 GBX1Q14549 363 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 KBTBD12Q3ZCT8 623 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 HECTD2Q5U5R9 776 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 FAM45BPQ6NSW5 357 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 UGT3A1Q6NUS8 523 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 ARMC6Q6NXE6 501 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 TMEM71Q6P5X7 295 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 KLHL35Q6PF15 583 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 UNC5DQ6UXZ4 953 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 ZNF574Q6ZN55 896 aaPredicted RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 OOSP2Q86WS3 158 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 PLXDC1Q8IUK5 500 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 DCUN1D3Q8IWE4 304 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 PPM1NQ8N819 430 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 OR4E2Q8NGC2 313 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 OR5K2Q8NHB8 316 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 FAM45AQ8TCE6 357 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 ZFPM2Q8WW38 1151 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 INPP5DQ92835 1189 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 NXPE2Q96DL1 559 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 LIN37Q96GY3 246 aaPredicted RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 FOPNLQ96NB1 174 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 TGM7Q96PF1 710 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 SRMSQ9H3Y6 488 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 LATS2Q9NRM7 1088 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 TAS2R13Q9NYV9 303 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 CORO1CQ9ULV4 474 aaPredicted RBP11.52□□□□□ -0.57
HPS4-214ENST00000485842 DHRS7Q9Y394 339 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 KNTC1P50748 2209 aa11.52□□□□□ -0.57
HPS4-214ENST00000485842 GSAPA4D1B5 854 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 PMS2P1A4D2B8 440 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 OR5K3A6NET4 321 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 TRABD2BA6NFA1 517 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 RASSF9O75901 435 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 SLU7O95391 586 aaKnown RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 RPN2P04844 631 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 MPOP05164 745 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 THRAP10827 490 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 HGFP14210 728 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 PHBP35232 272 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 PGGT1BP53609 377 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 LIMK2P53671 638 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 PPP1CAP62136 330 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 GABREP78334 506 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 TIAL1Q01085 375 aaKnown RBP eCLIP11.51□□□□□ -0.57
HPS4-214ENST00000485842 ZFP36L1Q07352 338 aaKnown RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 C16orf72Q14CZ0 275 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 FAM92BQ6ZTR7 304 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 RAB11FIP2Q7L804 512 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 PIWIL4Q7Z3Z4 852 aaKnown RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 MRRFQ96E11 262 aaKnown RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 VPS39Q96JC1 886 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 OLFM1Q99784 485 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 CPNE1Q99829 537 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 RHOJQ9H4E5 214 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 POLG2Q9UHN1 485 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 SATB2Q9UPW6 733 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 ICKQ9UPZ9 632 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 LOXL2Q9Y4K0 774 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 AK5Q9Y6K8 562 aa11.51□□□□□ -0.57
HPS4-214ENST00000485842 MN1Q10571 1320 aaPredicted RBP11.51□□□□□ -0.57
HPS4-214ENST00000485842 KRT87PA6NCN2 255 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 BTN3A1O00481 513 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 KIF1CO43896 1103 aaKnown RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 KDM1AO60341 852 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 FAM155BO75949 473 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 C1orf105O95561 183 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 C1QAP02745 245 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 C9P02748 559 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 TPBGLP0DKB5 382 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 ENO3P13929 434 aaPredicted RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 FDXRP22570 491 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms