RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SERTAD3Q9UJW9 196 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 REXO2Q9Y3B8 237 aaKnown RBP18.64■□□□□ 0.57
COL27A1-205ENST00000485397 PRSS21Q9Y6M0 314 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 C2orf74A8MZ97 194 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 H7C0S8 307 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 ZNF185O15231 689 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 ZNF749O43361 778 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 CEACAM4O75871 244 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 MSL3P1P0C860 447 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 CETN2P41208 172 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 RPA4Q13156 261 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 POU6F1Q14863 301 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 PARP6Q2NL67 630 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 ZNF449Q6P9G9 518 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 ARHGEF18Q6ZSZ5 1173 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 TRIM73Q86UV7 250 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 FAM71DQ8N9W8 422 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 GALNT11Q8NCW6 608 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 LRRC45Q96CN5 670 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 NUDT9Q9BW91 350 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 LACRTQ9GZZ8 138 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 FAM60AQ9NP50 221 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 LUZP4Q9P127 313 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 ICKQ9UPZ9 632 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 ZNF451Q9Y4E5 1061 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 MAP4K5Q9Y4K4 846 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 SEC16AO15027 2179 aa18.63■□□□□ 0.57
COL27A1-205ENST00000485397 CCDC78A2IDD5 438 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 A6NL46 340 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 E7EQ34 232 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 MAP3K7O43318 606 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 SORBS2O94875 1100 aaKnown RBP18.62■□□□□ 0.57
COL27A1-205ENST00000485397 VAV2P52735 878 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 CACNG1Q06432 222 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 NCF4Q15080 339 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 ZNF385CQ66K41 422 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-205ENST00000485397 TAB3Q8N5C8 712 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-205ENST00000485397 LRRC57Q8N9N7 239 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 OR5AR1Q8NGP9 310 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 CALR3Q96L12 384 aaKnown RBP18.62■□□□□ 0.57
COL27A1-205ENST00000485397 MFRPQ9BY79 579 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 SMARCAL1Q9NZC9 954 aa18.62■□□□□ 0.57
COL27A1-205ENST00000485397 GRID2IPA4D2P6 1211 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 OR51F1A6NGY5 319 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 HCRTR1O43613 425 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 ATXN8OSP0DMR3 200 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 GDF10P55107 478 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 ATP1A4Q13733 1029 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 BRD3Q15059 726 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 DEFB110Q30KQ9 67 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 PRR30Q53SZ7 412 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-205ENST00000485397 SPESP1Q6UW49 350 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 RAD9BQ6WBX8 426 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 NAPRTQ6XQN6 538 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 UNC5AQ6ZN44 842 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 STYXQ8WUJ0 223 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 PANX2Q96RD6 677 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 LRRC40Q9H9A6 602 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 LRRC4CQ9HCJ2 640 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 PCDHGB7Q9Y5F8 929 aa18.61■□□□□ 0.57
COL27A1-205ENST00000485397 PCSK5Q92824 1860 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 USP9YO00507 2555 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 USP9XQ93008 2570 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 BTNL10A8MVZ5 291 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 AP2A2O94973 939 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 CBSLP0DN79 551 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 UGT2B7P16662 529 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 CBSP35520 551 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 INPP5JQ15735 1006 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 ZIC1Q15915 447 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 FHL5Q5TD97 284 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 HIST2H2BCQ6DN03 193 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 JMJD6Q6NYC1 403 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 TMTC1Q8IUR5 882 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 RBMXL3Q8N7X1 1067 aaKnown RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 C19orf47Q8N9M1 422 aaKnown RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 TMEM102Q8N9M5 508 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 GLIS1Q8NBF1 620 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 ELMO1Q92556 727 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 OR2A14Q96R47 310 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 SPRTNQ9H040 489 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 SPHK1Q9NYA1 384 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 ASF1AQ9Y294 204 aa18.6■□□□□ 0.57
COL27A1-205ENST00000485397 R3HDM2Q9Y2K5 976 aaKnown RBP18.6■□□□□ 0.57
COL27A1-205ENST00000485397 GOLGA6L9A6NEM1 432 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 C9J4A7 227 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 LIN7AO14910 233 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-205ENST00000485397 DPM1O60762 260 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 AGFG2O95081 481 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 CTSBP07858 339 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 HBQ1P09105 142 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 GSTM1P09488 218 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 TPBGLP0DKB5 382 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 AGXTP21549 392 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 ACADLP28330 430 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 OTX2P32243 289 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 NSG1P42857 185 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 GSTM4Q03013 218 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 RAPSNQ13702 412 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms