RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 MRPL9Q9BYD2 267 aaKnown RBP4.29□□□□□ -1.72
XPA-203ENST00000485042 DNAI2Q9GZS0 605 aa4.29□□□□□ -1.72
XPA-203ENST00000485042 WDR26Q9H7D7 661 aa4.29□□□□□ -1.72
XPA-203ENST00000485042 PLAC1Q9HBJ0 212 aa4.29□□□□□ -1.72
XPA-203ENST00000485042 MTRRQ9UBK8 725 aa4.29□□□□□ -1.72
XPA-203ENST00000485042 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
XPA-203ENST00000485042 RNF123Q5XPI4 1314 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PCDH11XQ9BZA7 1347 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PCDH11YQ9BZA8 1340 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 ZNF541Q9H0D2 1346 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 DLEC1Q9Y238 1755 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 A0A0U1RQK1 487 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 FAM90A26D6RGX4 464 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 SOCS6O14544 535 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 STX6O43752 255 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 MOSPD3O75425 235 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 SOX30O94993 753 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 LCATP04180 440 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 CELA2AP08217 269 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PRF1P14222 555 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 UGT1A1P22309 533 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 RFX5P48382 616 aaPredicted RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 MXI1P50539 228 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 CLDN20P56880 219 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 CDK3Q00526 305 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 YWHAHQ04917 246 aaPredicted RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 SRSF1Q07955 248 aaKnown RBP eCLIP4.28□□□□□ -1.72
XPA-203ENST00000485042 MZT1Q08AG7 82 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 ACSM1Q08AH1 577 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 SLMAPQ14BN4 828 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 VWC2Q2TAL6 325 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 MTX3Q5HYI7 312 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 NHSL2Q5HYW2 709 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 RGMBQ6NW40 437 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 ZNF534Q76KX8 674 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PIWIL3Q7Z3Z3 882 aaKnown RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 SPATA21Q7Z572 469 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 UNC45BQ8IWX7 931 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 CEP57L1Q8IYX8 460 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 SLC5A8Q8N695 610 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 ZNF548Q8NEK5 533 aaPredicted RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 OR2AK2Q8NG84 335 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PPP4R1Q8TF05 950 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 MR1Q95460 341 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PRMT6Q96LA8 375 aaPredicted RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 SORCS2Q96PQ0 1159 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 CRAMP1Q96RY5 1269 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 MTERF1Q99551 399 aaKnown RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 TMEM79Q9BSE2 394 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 MOV10L1Q9BXT6 1211 aaKnown RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 MMADHCQ9H3L0 296 aaPredicted RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 TBC1D17Q9HA65 648 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 PRMT7Q9NVM4 692 aaPredicted RBP4.28□□□□□ -1.72
XPA-203ENST00000485042 MCM9Q9NXL9 1143 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 FZD10Q9ULW2 581 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 C10orf71Q711Q0 1435 aa4.28□□□□□ -1.72
XPA-203ENST00000485042 TJP1Q07157 1748 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 ADAMTS7Q9UKP4 1686 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 A0A1B0GVT2 93 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 A0A1W2PPM1 405 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 PLK4O00444 970 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 PSMD14O00487 310 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 XRCC3O43542 346 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 BAG2O95816 211 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 KCNA5P22460 613 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 EEF1B2P24534 225 aaKnown RBP4.27□□□□□ -1.73
XPA-203ENST00000485042 C21orf33P30042 268 aaPredicted RBP4.27□□□□□ -1.73
XPA-203ENST00000485042 TCF7P36402 384 aaPredicted RBP4.27□□□□□ -1.73
XPA-203ENST00000485042 MTHFRP42898 656 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 CLCNKAP51800 687 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
XPA-203ENST00000485042 TUBB2AQ13885 445 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 ZNF674Q2M3X9 581 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 ODF3L2Q3SX64 289 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 KRTCAP3Q53RY4 240 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 SLC10A5Q5PT55 438 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 ZNF626Q68DY1 528 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 IYDQ6PHW0 289 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 MSANTD1Q6ZTZ1 278 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 SPATA19Q7Z5L4 167 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 PIP4P1Q86T03 277 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 CARNMT1Q8N4J0 409 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 CHCHD4Q8N4Q1 142 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 ACVR1CQ8NER5 493 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 WFIKKN2Q8TEU8 576 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 ROBO4Q8WZ75 1007 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 SPSB1Q96BD6 273 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 SPDL1Q96EA4 605 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 FAM81BQ96LP2 452 aa4.27□□□□□ -1.73
XPA-203ENST00000485042 RMDN2Q96LZ7 410 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms