RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PHC3Q8NDX5 983 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 UBE2Q2Q8WVN8 375 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 CLIP3Q96DZ5 547 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 SLC25A23Q9BV35 468 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ING2Q9H160 280 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ACTR5Q9H9F9 607 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ACSS2Q9NR19 701 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 POLG2Q9UHN1 485 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 TCFL5Q9UL49 500 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ZNF451Q9Y4E5 1061 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ERI2A8K979 691 aaKnown RBP11.1□□□□□ -0.63
SCFD1-206ENST00000484733 DNAJB5O75953 348 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 FTH1P02794 183 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 TPH1P17752 444 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 CYP2A7P20853 494 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ITGA1P56199 1179 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ZNF385CQ66K41 422 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-206ENST00000484733 SPESP1Q6UW49 350 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 FAM198BQ6UWH4 519 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.1□□□□□ -0.632e-9■■■■■ 43.2
SCFD1-206ENST00000484733 DHRS4Q9BTZ2 278 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 SNX7Q9UNH6 387 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ICKQ9UPZ9 632 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 SLC5A10A0PJK1 596 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 ARGFXA6NJG6 315 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 E7EQ34 232 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 PRSS56P0CW18 603 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 SHMT2P34897 504 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 PTGIRP43119 386 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 PRAMEF17Q5VTA0 474 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 CPZQ66K79 652 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 CDHR3Q6ZTQ4 885 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 MED25Q71SY5 747 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 TBC1D21Q8IYX1 336 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 CLDN19Q8N6F1 224 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 ACRBPQ8NEB7 543 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 TCTN2Q96GX1 697 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 ALS2CR12Q96Q35 445 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 RANBP9Q96S59 729 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 FRMD8P1Q9BZ68 369 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-206ENST00000484733 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 PRSS21Q9Y6M0 314 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 F8W8V4 182 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 H3BMH7 237 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 SUN1O94901 812 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 STIP1P31948 543 aaKnown RBP11.09□□□□□ -0.63
SCFD1-206ENST00000484733 FOXN2P32314 431 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 GABRA4P48169 554 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 LMAN1P49257 510 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 CCL11P51671 97 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 GDF10P55107 478 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 POU6F1Q14863 301 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 KIAA1328Q86T90 577 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 ZBTB2Q8N680 514 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 TMEM102Q8N9M5 508 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-206ENST00000484733 FLVCR1-AS1Q8TAF5 88 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 HES6Q96HZ4 224 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 C17orf62Q9BQA9 187 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 OR6C2Q9NZP2 312 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 R3HDM2Q9Y2K5 976 aaKnown RBP11.09□□□□□ -0.63
SCFD1-206ENST00000484733 AP1M2Q9Y6Q5 423 aa11.09□□□□□ -0.63
SCFD1-206ENST00000484733 TMEM63AO94886 807 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 CD63P08962 238 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 GP1BBP13224 206 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 AGXTP21549 392 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 MSNP26038 577 aaKnown RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 MLLT10P55197 1068 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 PRKG2Q13237 762 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 NCF4Q15080 339 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 UNC5AQ6ZN44 842 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 TMEM139Q8IV31 216 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 C19orf47Q8N9M1 422 aaKnown RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 IP6K3Q96PC2 410 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 OR2A14Q96R47 310 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 TMEM121Q9BTD3 319 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 HGH1Q9BTY7 390 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 XKR8Q9H6D3 395 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 MAP4K5Q9Y4K4 846 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 PIKFYVEQ9Y2I7 2098 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 ZNF749O43361 778 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 KDM1AO60341 852 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 SORBS2O94875 1100 aaKnown RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 OR56A5P0C7T3 313 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 UGT2B7P16662 529 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 FDFT1P37268 417 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 RRADP55042 308 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 ACVR1Q04771 509 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 KIF5AQ12840 1032 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 CDH17Q12864 832 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 SLC5A12Q1EHB4 618 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 MICALCLQ6ZW33 695 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 HOOK3Q86VS8 718 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 RAB43Q86YS6 212 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 OR5AR1Q8NGP9 310 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 OR5K2Q8NHB8 316 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms