RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PIH1D1Q9NWS0 290 aaKnown RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 SMARCAL1Q9NZC9 954 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 CPNE7Q9UBL6 633 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 ASIC3Q9UHC3 531 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TLK1Q9UKI8 766 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 POLHQ9Y253 713 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 VPS9D1Q9Y2B5 631 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 BOD1L1Q8NFC6 3051 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 PIPSLA2A3N6 862 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CCDC162PA2VCL2 907 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 LILRA5A6NI73 299 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 OR2AG2A6NM03 316 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 PDZK1P1A8MUH7 402 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 LIN7AO14910 233 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 FANCGO15287 622 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 GPR39O43194 453 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 RFPL1O75677 317 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 RASSF9O75901 435 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 DNAJB5O75953 348 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 TMEM63AO94886 807 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 GOT2P00505 430 aaKnown RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 FTH1P02794 183 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 OR56A5P0C7T3 313 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CCNYL3P0C7X3 344 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 AMD1P17707 334 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 MGAT1P26572 445 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 NDUFS1P28331 727 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CD151P48509 253 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 ADARP55265 1226 aaKnown RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 UBE2IP63279 158 aaKnown RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 SH3BP2P78314 561 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CKAP4Q07065 602 aaKnown RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CBLBQ13191 982 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 MAP7Q14244 749 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CRTC2Q53ET0 693 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 DNAJC21Q5F1R6 531 aaKnown RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 FNBP1LQ5T0N5 605 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 KIAA0930Q6ICG6 404 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 MRNIPQ6NTE8 343 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 SYT10Q6XYQ8 523 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF572Q7Z3I7 529 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 SPATA4Q8NEY3 305 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 GPR150Q8NGU9 434 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 OR6P1Q8NGX9 317 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 GABPB2Q8TAK5 448 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-213ENST00000484112 LRRC39Q96DD0 335 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 C9orf72Q96LT7 481 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 OSGEPL1Q9H4B0 414 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 CATSPERZQ9NTU4 200 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 SYBUQ9NX95 663 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 SLC23A2Q9UGH3 650 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 LNPEPQ9UIQ6 1025 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 HEBP2Q9Y5Z4 205 aa9.75□□□□□ -0.85
CPSF4-213ENST00000484112 TCRBV7S3A2A0A539 114 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 A1L4Q6 167 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 CCL22O00626 93 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 KPNA5O15131 536 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 CD3EAPO15446 510 aaKnown RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SGTAO43765 313 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 USP1O94782 785 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 TTC4O95801 387 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 VIPP01282 170 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 PDGFAP04085 211 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 POLBP06746 335 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SLC35G4P0C7Q5 338 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 OGNP20774 298 aaKnown RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 IVDP26440 423 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 CA5AP35218 305 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 LEPRP48357 1165 aaKnown RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SEPT7Q16181 437 aaKnown RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 DBN1Q16643 649 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 PLA2G4EQ3MJ16 856 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 ANKRD22Q5VYY1 191 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SDCCAG8Q86SQ7 713 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 TRIM48Q8IWZ4 208 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 KLHL7Q8IXQ5 586 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 PIANPQ8IYJ0 282 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 PDIK1LQ8N165 341 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 CPT1CQ8TCG5 803 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 CALML6Q8TD86 181 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 CXorf40BQ96DE9 158 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SNF8Q96H20 258 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF778Q96MU6 729 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 FAM96AQ9H5X1 160 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SIDT1Q9NXL6 827 aaKnown RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SCHIP1Q9P0W5 487 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-213ENST00000484112 SLC2A6Q9UGQ3 507 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 KCND3Q9UK17 655 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 DNAJC16Q9Y2G8 782 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 COLEC10Q9Y6Z7 277 aa9.74□□□□□ -0.85
CPSF4-213ENST00000484112 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 H3BMM5 538 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 PRMT5O14744 637 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 TOX3O15405 576 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 KIF1CO43896 1103 aaKnown RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 SPAG6O75602 509 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 CREG1O75629 220 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 UBXN7O94888 489 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 C9P02748 559 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms