RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 ULK2Q8IYT8 1036 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 PLA2G15Q8NCC3 412 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 FBXO15Q8NCQ5 510 aaPredicted RBP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 RP9Q8TA86 221 aaKnown RBP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 ZFR2Q9UPR6 939 aaKnown RBP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 NCKAP1Q9Y2A7 1128 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 LRRC42Q9Y546 428 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 A0A1B0GTL3 188 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 SRFP11831 508 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 ZNF8P17098 575 aaPredicted RBP25.64■■□□□ 1.69
SHOX2-204ENST00000483851 PRDX3P30048 256 aaKnown RBP25.64■■□□□ 1.69
SHOX2-204ENST00000483851 ERVPABLB-1P60509 514 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 SGCGQ13326 291 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 SQLEQ14534 574 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 C18orf21Q32NC0 220 aaPredicted RBP25.64■■□□□ 1.69
SHOX2-204ENST00000483851 TRIM74Q86UV6 250 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 HEATR4Q86WZ0 1026 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 OR52B6Q8NGF0 335 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 OR2L2Q8NH16 312 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 HM13Q8TCT9 377 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 ATL1Q8WXF7 558 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 ATP6V1E2Q96A05 226 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 FBXL8Q96CD0 374 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 SIPA1Q96FS4 1042 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 FAM161BQ96MY7 647 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 CATSPER2Q96P56 530 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 LENG8Q96PV6 779 aaPredicted RBP25.64■■□□□ 1.69
SHOX2-204ENST00000483851 KCNA7Q96RP8 456 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 DPEP2Q9H4A9 486 aa25.64■■□□□ 1.69
SHOX2-204ENST00000483851 OR4F21O95013 312 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 PSMG1O95456 288 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 EBLN1P0CF75 366 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 PIK3R1P27986 724 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 TRAF3Q13114 568 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 CCINQ13939 588 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 TMEM198Q66K66 360 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 TP53I13Q8NBR0 393 aaPredicted RBP25.63■■□□□ 1.69
SHOX2-204ENST00000483851 OR14C36Q8NHC7 312 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 FAM3CQ92520 227 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 TUBB1Q9H4B7 451 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 GULP1Q9UBP9 304 aa25.63■■□□□ 1.69
SHOX2-204ENST00000483851 COPG1Q9Y678 874 aaKnown RBP25.63■■□□□ 1.69
SHOX2-204ENST00000483851 A0A088AWK7 358 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 MGAT4DA6NG13 374 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 H0Y3Z8 333 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 H3BM21 787 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 PCCBP05166 539 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 COX4I1P13073 169 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 SLC6A12P48065 614 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 ADPRHP54922 357 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 RPA4Q13156 261 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 XKR7Q5GH72 579 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 MILR1Q7Z6M3 343 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 ZNF547Q8IVP9 402 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 DDIASQ8IXT1 998 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 C3orf30Q96M34 536 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 CCDC138Q96M89 665 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 ZNF570Q96NI8 536 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 TRPS1Q9UHF7 1281 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 SLC7A8Q9UHI5 535 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 ATG2BQ96BY7 2078 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 KRT36O76013 467 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 OGFOD2Q6N063 350 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 LETMD1Q6P1Q0 360 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 HORMAD1Q86X24 394 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 OR4F6Q8NGB9 312 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 MAGEB10Q96LZ2 347 aaPredicted RBP25.62■■□□□ 1.69
SHOX2-204ENST00000483851 THTPAQ9BU02 230 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 SLC17A9Q9BYT1 436 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 AKTIPQ9H8T0 292 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 RIC8BQ9NVN3 520 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 MMP17Q9ULZ9 603 aa25.62■■□□□ 1.69
SHOX2-204ENST00000483851 SZT2Q5T011 3432 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 VGLL3A8MV65 326 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 MAN2B1O00754 1011 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 POP7O75817 140 aaKnown RBP25.61■■□□□ 1.69
SHOX2-204ENST00000483851 PTDSS1P48651 473 aaKnown RBP25.61■■□□□ 1.69
SHOX2-204ENST00000483851 TDGQ13569 410 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 SKIV2LQ15477 1246 aaKnown RBP25.61■■□□□ 1.69
SHOX2-204ENST00000483851 TRMT5Q32P41 509 aaKnown RBP25.61■■□□□ 1.69
SHOX2-204ENST00000483851 SLC44A4Q53GD3 710 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 KLHDC8AQ8IYD2 350 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 CFAP206Q8IYR0 622 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 POU5F2Q8N7G0 328 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 METTL6Q8TCB7 284 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 HLA-CQ95604 372 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 CLPTM1LQ96KA5 538 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 RTKNQ9BST9 563 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 WDR26Q9H7D7 661 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 PHPT1Q9NRX4 125 aaPredicted RBP25.61■■□□□ 1.69
SHOX2-204ENST00000483851 TIMM22Q9Y584 194 aa25.61■■□□□ 1.69
SHOX2-204ENST00000483851 TRIOBPQ9H2D6 2365 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 A0A1W2PQU0 124 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 MEI4A8MW99 385 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 SOX1O00570 391 aaPredicted RBP25.6■■□□□ 1.69
SHOX2-204ENST00000483851 RNGTTO60942 597 aaKnown RBP25.6■■□□□ 1.69
SHOX2-204ENST00000483851 WDR47O94967 919 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 ASGR2P07307 311 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 PRR35P0CG20 571 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms