RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CDC23Q9UJX2 597 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 ASF1AQ9Y294 204 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 TEX264Q9Y6I9 313 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 OR6C74A6NCV1 312 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 TLCD2A6NGC4 264 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 E7ESA3 106 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 AGRPO00253 132 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 KIF1CO43896 1103 aaKnown RBP17.49■□□□□ 0.39
HDAC6-225ENST00000483506 TUBB4AP04350 444 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 PKMP14618 531 aaKnown RBP17.49■□□□□ 0.39
HDAC6-225ENST00000483506 NELFEP18615 380 aaKnown RBP17.49■□□□□ 0.39
HDAC6-225ENST00000483506 ATP5DP30049 168 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 FMO4P31512 558 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 SLC1A2P43004 574 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 ARL4CP56559 192 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 TLE3Q04726 772 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 FRG1Q14331 258 aaKnown RBP17.49■□□□□ 0.39
HDAC6-225ENST00000483506 CACHD1Q5VU97 1274 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 UNC5DQ6UXZ4 953 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 FAM92BQ6ZTR7 304 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 KCNMB4Q86W47 210 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 FAM129CQ86XR2 697 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 KMT5CQ86Y97 462 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 CNTN4Q8IWV2 1026 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 OR4E2Q8NGC2 313 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 ART4Q93070 314 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 PMEPA1Q969W9 287 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 SLC41A2Q96JW4 573 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 ZPBPQ9BS86 351 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 HGH1Q9BTY7 390 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 TRIM31Q9BZY9 425 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 SRMSQ9H3Y6 488 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 SLC39A1Q9NY26 324 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 WHRNQ9P202 907 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 KLHL42Q9P2K6 505 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 FBXO5Q9UKT4 447 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 POMT2Q9UKY4 750 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 ICKQ9UPZ9 632 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 CRYL1Q9Y2S2 319 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 SNX24Q9Y343 169 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 SDK2Q58EX2 2172 aa17.49■□□□□ 0.39
HDAC6-225ENST00000483506 NIPSNAP2O75323 286 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 RASSF9O75901 435 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 LIPCP11150 499 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 ELK3P41970 407 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 ABCG1P45844 678 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 KPNA2P52292 529 aaKnown RBP17.48■□□□□ 0.39
HDAC6-225ENST00000483506 CSE1LP55060 971 aaKnown RBP17.48■□□□□ 0.39
HDAC6-225ENST00000483506 CKAP4Q07065 602 aaKnown RBP17.48■□□□□ 0.39
HDAC6-225ENST00000483506 CLN3Q13286 438 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 CTBP1Q13363 440 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 HSP90AA5PQ58FG0 334 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 DNTTIP2Q5QJE6 756 aaKnown RBP17.48■□□□□ 0.39
HDAC6-225ENST00000483506 DCAF12Q5T6F0 453 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 DUPD1Q68J44 220 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 GALNT7Q86SF2 657 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 AMIGO1Q86WK6 493 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 DTX1Q86Y01 620 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 UNC5BQ8IZJ1 945 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 C2CD4AQ8NCU7 369 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-225ENST00000483506 PWWP2AQ96N64 755 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 MAP3K3Q99759 626 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 B3GALT1Q9Y5Z6 326 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 COMMD10Q9Y6G5 202 aa17.48■□□□□ 0.39
HDAC6-225ENST00000483506 IGHV5-51A0A0C4DH38 117 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 BTN3A3O00478 584 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 BTN3A1O00481 513 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 RPN2P04844 631 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 TPBGLP0DKB5 382 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 ITPKBP27987 946 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 SHMT2P34897 504 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 MRPS25P82663 173 aaKnown RBP17.47■□□□□ 0.39
HDAC6-225ENST00000483506 PRKAA1Q13131 559 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 PRKG2Q13237 762 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 ANKS6Q68DC2 871 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 ARMC6Q6NXE6 501 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 ZNF549Q6P9A3 640 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 CEACAM20Q6UY09 585 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 UNC5AQ6ZN44 842 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 KIAA0408Q6ZU52 694 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 DCUN1D3Q8IWE4 304 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 ADGRF3Q8IZF5 1079 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 GABPB2Q8TAK5 448 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-225ENST00000483506 KCNJ9Q92806 393 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 CERS2Q96G23 380 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 MENTQ9BUN1 341 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 SPRY4Q9C004 299 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 FBXO6Q9NRD1 293 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-225ENST00000483506 OR6C2Q9NZP2 312 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 MED16Q9Y2X0 877 aa17.47■□□□□ 0.39
HDAC6-225ENST00000483506 NBEAQ8NFP9 2946 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 ZFYVE26Q68DK2 2539 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 KIF2AO00139 706 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-225ENST00000483506 KDM1AO60341 852 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 ERVK-10P10266 1014 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 POLR2CP19387 275 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-225ENST00000483506 CLCN7P51798 805 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 MPP1Q00013 466 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms