RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ZDHHC12Q96GR4 267 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 NAF1Q96HR8 494 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 RAB17Q9H0T7 212 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 TRIT1Q9H3H1 467 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 SRMSQ9H3Y6 488 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 XKR8Q9H6D3 395 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 PPANQ9NQ55 473 aaKnown RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 OCIAD1Q9NX40 245 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 SLC17A6Q9P2U8 582 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 GALPQ9UBC7 116 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 PLAGL1Q9UM63 463 aa13.03□□□□□ -0.32
SSR1-208ENST00000483409 ANKRD11Q6UB99 2663 aaPredicted RBP13.03□□□□□ -0.32
SSR1-208ENST00000483409 E5RI56 91 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 E7ESA3 106 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 H3BMM5 538 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 KPNA5O15131 536 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 PRAMEF10O60809 474 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 SLCO2B1O94956 709 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 TUBB4AP04350 444 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 ANKRD34CP0C6C1 535 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 POLR2CP19387 275 aaPredicted RBP13.02□□□□□ -0.33
SSR1-208ENST00000483409 SLC5A2P31639 672 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.33
SSR1-208ENST00000483409 TRADDQ15628 312 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 DNTTIP2Q5QJE6 756 aaKnown RBP13.02□□□□□ -0.33
SSR1-208ENST00000483409 PLEKHS1Q5SXH7 462 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 STEAP4Q687X5 459 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 ARMC6Q6NXE6 501 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 ZNF549Q6P9A3 640 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 TRMT10BQ6PF06 316 aaKnown RBP13.02□□□□□ -0.33
SSR1-208ENST00000483409 CNSTQ6PJW8 725 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 CLEC14AQ86T13 490 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 TBC1D21Q8IYX1 336 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 ZBED8Q8IZ13 594 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 C2CD4AQ8NCU7 369 aaPredicted RBP13.02□□□□□ -0.33
SSR1-208ENST00000483409 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 ART4Q93070 314 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 RAB33BQ9H082 229 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 CCDC68Q9H2F9 335 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 FOXJ2Q9P0K8 574 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 EPHA6Q9UF33 1036 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 CIDEBQ9UHD4 219 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 ICKQ9UPZ9 632 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 RUVBL2Q9Y230 463 aaKnown RBP13.02□□□□□ -0.33
SSR1-208ENST00000483409 AHCTF1Q8WYP5 2266 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 CACNA1BQ00975 2339 aa13.02□□□□□ -0.33
SSR1-208ENST00000483409 GSAPA4D1B5 854 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 C9orf172C9J069 976 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 BTN3A3O00478 584 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 HAUS5O94927 633 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 EIF2S3P41091 472 aaKnown RBP13.01□□□□□ -0.33
SSR1-208ENST00000483409 ABCG1P45844 678 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 KPNA2P52292 529 aaKnown RBP13.01□□□□□ -0.33
SSR1-208ENST00000483409 PLTPP55058 493 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 PRKAA1Q13131 559 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 CAPN12Q6ZSI9 719 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 PRSS42Q7Z5A4 293 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 ZBTB2Q8N680 514 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 BMPERQ8N8U9 685 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 GABPB2Q8TAK5 448 aaPredicted RBP13.01□□□□□ -0.33
SSR1-208ENST00000483409 PPM1MQ96MI6 270 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 SLC30A3Q99726 388 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 LRRC1Q9BTT6 524 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
SSR1-208ENST00000483409 TFB2MQ9H5Q4 396 aaKnown RBP13.01□□□□□ -0.33
SSR1-208ENST00000483409 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 SLC39A1Q9NY26 324 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 PCDHGA7Q9Y5G6 932 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 PCM1Q15154 2024 aa13.01□□□□□ -0.33
SSR1-208ENST00000483409 LAMA5O15230 3695 aa13□□□□□ -0.33
SSR1-208ENST00000483409 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
SSR1-208ENST00000483409 ZZEF1O43149 2961 aa13□□□□□ -0.33
SSR1-208ENST00000483409 SPTBP11277 2137 aa13□□□□□ -0.33
SSR1-208ENST00000483409 IGHV5-51A0A0C4DH38 117 aa13□□□□□ -0.33
SSR1-208ENST00000483409 ESYT3A0FGR9 886 aa13□□□□□ -0.33
SSR1-208ENST00000483409 TLCD2A6NGC4 264 aa13□□□□□ -0.33
SSR1-208ENST00000483409 B4E171 279 aa13□□□□□ -0.33
SSR1-208ENST00000483409 BTN3A1O00481 513 aa13□□□□□ -0.33
SSR1-208ENST00000483409 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
SSR1-208ENST00000483409 TOX3O15405 576 aaPredicted RBP13□□□□□ -0.33
SSR1-208ENST00000483409 RRP8O43159 456 aaKnown RBP13□□□□□ -0.33
SSR1-208ENST00000483409 GABRB3P28472 473 aa13□□□□□ -0.33
SSR1-208ENST00000483409 TSPAN7P41732 249 aa13□□□□□ -0.33
SSR1-208ENST00000483409 BDKRB1P46663 353 aa13□□□□□ -0.33
SSR1-208ENST00000483409 CLCN7P51798 805 aa13□□□□□ -0.33
SSR1-208ENST00000483409 SH3BP2P78314 561 aa13□□□□□ -0.33
SSR1-208ENST00000483409 CUL1Q13616 776 aa13□□□□□ -0.33
SSR1-208ENST00000483409 ACSBG2Q5FVE4 666 aa13□□□□□ -0.33
SSR1-208ENST00000483409 TEDDM1Q5T9Z0 273 aa13□□□□□ -0.33
SSR1-208ENST00000483409 TMEM164Q5U3C3 297 aa13□□□□□ -0.33
SSR1-208ENST00000483409 ANKS6Q68DC2 871 aa13□□□□□ -0.33
SSR1-208ENST00000483409 FBXO38Q6PIJ6 1188 aa13□□□□□ -0.33
SSR1-208ENST00000483409 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
SSR1-208ENST00000483409 UNC5DQ6UXZ4 953 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms