RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 PITPNM3Q9BZ71 974 aa16.07■□□□□ 0.16
RAB11FIP3-209ENST00000483002 LRRC40Q9H9A6 602 aa16.07■□□□□ 0.16
RAB11FIP3-209ENST00000483002 PCMTD2Q9NV79 361 aa16.07■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TCFL5Q9UL49 500 aa16.07■□□□□ 0.16
RAB11FIP3-209ENST00000483002 PACSIN2Q9UNF0 486 aaPredicted RBP16.07■□□□□ 0.16
RAB11FIP3-209ENST00000483002 C2orf74A8MZ97 194 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 RAB40ALP0C0E4 278 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 RORAP35398 523 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CD97P48960 835 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 VAV2P52735 878 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 GDF10P55107 478 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 BOP1Q14137 746 aaKnown RBP16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 BRD3Q15059 726 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 DBN1Q16643 649 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 PTCHD3Q3KNS1 767 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ZNF789Q5FWF6 425 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 HOOK3Q86VS8 718 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 SYTL1Q8IYJ3 562 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ADGRF3Q8IZF5 1079 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 FAM26EQ8N5C1 309 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 UBL4BQ8N7F7 174 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ADAMTS17Q8TE56 1095 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TMEM121Q9BTD3 319 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ACTR10Q9NZ32 417 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 PCDHGA9Q9Y5G4 932 aaKnown RBP16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 PRSS21Q9Y6M0 314 aa16.06■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CLEC18AA5D8T8 446 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 E7EQ34 232 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 PSMD3O43242 534 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ZNF749O43361 778 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TMEM63AO94886 807 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 AP2A2O94973 939 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CAPN1P07384 714 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 MSL3P1P0C860 447 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ITGA1P56199 1179 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 P3H1Q32P28 736 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 NADK2Q4G0N4 442 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CLEC18BQ6UXF7 455 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 NAPRTQ6XQN6 538 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CDHR3Q6ZTQ4 885 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 EFCAB3Q8N7B9 438 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CLEC18CQ8NCF0 446 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 OR5AR1Q8NGP9 310 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ELMO1Q92556 727 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 N4BP2L2Q92802 583 aaPredicted RBP16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 MRFAP1L1Q96HT8 127 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 MLXIPLQ9NP71 852 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ICKQ9UPZ9 632 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ASF1AQ9Y294 204 aa16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 R3HDM2Q9Y2K5 976 aaKnown RBP16.05■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TCRBV7S2A1N4TA0A589 114 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 OR51F1A6NGY5 319 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 A6NL46 340 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 LIN7AO14910 233 aaPredicted RBP16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ZNF185O15231 689 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 VPS4BO75351 444 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 AP2A1O95782 977 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 FTCDO95954 541 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 GSTM1P09488 218 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 NSG1P42857 185 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 GSTM4Q03013 218 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CCDC38Q502W7 563 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 SPESP1Q6UW49 350 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 FAM198BQ6UWH4 519 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 UNC5AQ6ZN44 842 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TRIM73Q86UV7 250 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 GPR135Q8IZ08 494 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 FAM60AQ9NP50 221 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 VPS4AQ9UN37 437 aa16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TDRKHQ9Y2W6 561 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 SPTBN1Q01082 2364 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP3-209ENST00000483002 USP9YO00507 2555 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 USP9XQ93008 2570 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ESPL1Q14674 2120 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CCDC88CQ9P219 2028 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 CCDC162PA2VCL2 907 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 MROH6A6NGR9 719 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 MIF4GDA9UHW6 222 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 FTH1P02794 183 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 HBQ1P09105 142 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 AGXTP21549 392 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 KIF5AQ12840 1032 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 KLF1Q13351 362 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 LINC00523Q86TU6 105 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 ZBTB2Q8N680 514 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 DNAAF3Q8N9W5 541 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 OR52K1Q8NGK4 314 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 SLC35B2Q8TB61 432 aa16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.03■□□□□ 0.161e-7■■■■■ 35.3
RAB11FIP3-209ENST00000483002 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 SPTAN1Q13813 2472 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-209ENST00000483002 A0A0U1RQJ8 604 aa16.02■□□□□ 0.16
RAB11FIP3-209ENST00000483002 C9J4A7 227 aa16.02■□□□□ 0.16
RAB11FIP3-209ENST00000483002 QSOX1O00391 747 aa16.02■□□□□ 0.16
RAB11FIP3-209ENST00000483002 OR2B3O76000 313 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms