RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 ZC3HC1Q86WB0 502 aaKnown RBP16.3■□□□□ 0.2
SF1-215ENST00000482693 MARCH9Q86YJ5 346 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 GPATCH11Q8N954 259 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 OR5AR1Q8NGP9 310 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 FAM45AQ8TCE6 357 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 CD200R1Q8TD46 325 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 FBF1Q8TES7 1133 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 SKA2Q8WVK7 121 aaPredicted RBP16.3■□□□□ 0.2
SF1-215ENST00000482693 ZDHHC12Q96GR4 267 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 MCMBPQ9BTE3 642 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 ZMYND15Q9H091 742 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 SRMSQ9H3Y6 488 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 RHOJQ9H4E5 214 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 NINJ2Q9NZG7 142 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 EPHA6Q9UF33 1036 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 TRMT6Q9UJA5 497 aaKnown RBP16.3■□□□□ 0.2
SF1-215ENST00000482693 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
SF1-215ENST00000482693 IGHV5-10-1A0A0J9YXX1 117 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 CXorf49A8MYA2 514 aaPredicted RBP16.29■□□□□ 0.2
SF1-215ENST00000482693 MATN4O95460 622 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 C1QAP02745 245 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 CCNFP41002 786 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 ABCG1P45844 678 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 CDKN2DP55273 166 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 TIAL1Q01085 375 aaKnown RBP eCLIP16.29■□□□□ 0.21e-7■□□□□ 9.3
SF1-215ENST00000482693 KBTBD12Q3ZCT8 623 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 RBM20Q5T481 1227 aaKnown RBP16.29■□□□□ 0.2
SF1-215ENST00000482693 PHF19Q5T6S3 580 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 LRRC8EQ6NSJ5 796 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 CTAGE3PQ8IX95 158 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 OR4E2Q8NGC2 313 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 OR52E1Q8NGJ3 308 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 CFAP61Q8NHU2 1237 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 ATXN7L3BQ96GX2 97 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 LIN37Q96GY3 246 aaPredicted RBP16.29■□□□□ 0.2
SF1-215ENST00000482693 SLC30A3Q99726 388 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 HGH1Q9BTY7 390 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 NRSN2Q9GZP1 204 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 SEMA6CQ9H3T2 930 aa16.29■□□□□ 0.2
SF1-215ENST00000482693 MN1Q10571 1320 aaPredicted RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 CCDC187A0A096LP49 1063 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 CAPN5O15484 640 aaPredicted RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 C9P02748 559 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 MPC1LP0DKB6 136 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 THRAP10827 490 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 FDXRP22570 491 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 SHMT2P34897 504 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 GP5P40197 560 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 EIF3IQ13347 325 aaKnown RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 KLHL38Q2WGJ6 581 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 GRTP1Q5TC63 336 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 ARMC6Q6NXE6 501 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 AMIGO1Q86WK6 493 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 DCUN1D3Q8IWE4 304 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 MAGEC3Q8TD91 643 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 JPH3Q8WXH2 748 aaPredicted RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■□□□ 12.7
SF1-215ENST00000482693 RSC1A1Q92681 617 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 CCDC74BQ96LY2 380 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 CYTH2Q99418 400 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 CDC42EP4Q9H3Q1 356 aaKnown RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 HRASLS2Q9NWW9 162 aa16.28■□□□□ 0.2
SF1-215ENST00000482693 AKAP7Q9P0M2 348 aaPredicted RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 TDRKHQ9Y2W6 561 aaKnown RBP16.28■□□□□ 0.2
SF1-215ENST00000482693 TRABD2BA6NFA1 517 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 MATN2O00339 956 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 HGSO14964 777 aaPredicted RBP16.27■□□□□ 0.2
SF1-215ENST00000482693 TOX3O15405 576 aaPredicted RBP16.27■□□□□ 0.2
SF1-215ENST00000482693 PIAS1O75925 651 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 C1orf105O95561 183 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 MCM3P25205 808 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 TNFRSF8P28908 595 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 SPRP35270 261 aaPredicted RBP16.27■□□□□ 0.2
SF1-215ENST00000482693 RGS4P49798 205 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
SF1-215ENST00000482693 PAQR3Q6TCH7 311 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 TRMT10CQ7L0Y3 403 aaKnown RBP16.27■□□□□ 0.2
SF1-215ENST00000482693 PPM1NQ8N819 430 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 WDR36Q8NI36 951 aaKnown RBP16.27■□□□□ 0.2
SF1-215ENST00000482693 RAD51AP1Q96B01 352 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 VPS39Q96JC1 886 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 ELMO2Q96JJ3 720 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 TGM7Q96PF1 710 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 RBBP8Q99708 897 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 ACSS3Q9H6R3 686 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 OR6C2Q9NZP2 312 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 TMEM9Q9P0T7 183 aa16.27■□□□□ 0.2
SF1-215ENST00000482693 PTPRBP23467 1997 aa16.26■□□□□ 0.19
SF1-215ENST00000482693 CEP295Q9C0D2 2601 aa16.26■□□□□ 0.19
SF1-215ENST00000482693 FAM95CA0A1B0GW59 222 aa16.26■□□□□ 0.19
SF1-215ENST00000482693 PSIP1O75475 530 aaKnown RBP16.26■□□□□ 0.19
SF1-215ENST00000482693 ACSL3O95573 720 aa16.26■□□□□ 0.19
SF1-215ENST00000482693 CATP04040 527 aaKnown RBP16.26■□□□□ 0.19
SF1-215ENST00000482693 ANKRD34CP0C6C1 535 aa16.26■□□□□ 0.19
SF1-215ENST00000482693 TPBGLP0DKB5 382 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms